RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 GRAMD1AQ96CP6 724 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 UBN1Q9NPG3 1134 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 DNM1LO00429 736 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 TLR3O15455 904 aaKnown RBP13.12□□□□□ -0.31
AFF3-215ENST00000498090 RALAP11233 206 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 EFNA5P52803 228 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 SNX1Q13596 522 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 CAPSQ13938 189 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 MTHFD1LQ6UB35 978 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 LRRC34Q8IZ02 419 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 ZCCHC9Q8N567 271 aaKnown RBP13.12□□□□□ -0.31
AFF3-215ENST00000498090 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
AFF3-215ENST00000498090 CFAP57Q96MR6 1250 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 MSTO1Q9BUK6 570 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 FRMD8P1Q9BZ68 369 aaPredicted RBP13.12□□□□□ -0.31
AFF3-215ENST00000498090 PHACTR1Q9C0D0 580 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 CCDC113Q9H0I3 377 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
AFF3-215ENST00000498090 SLC12A4Q9UP95 1085 aa13.12□□□□□ -0.31
AFF3-215ENST00000498090 DRG1Q9Y295 367 aaKnown RBP13.12□□□□□ -0.31
AFF3-215ENST00000498090 SCN10AQ9Y5Y9 1956 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 SNX3O60493 162 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 SUN1O94901 812 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 VNN1O95497 513 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 ACSL3O95573 720 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 CCL5P13501 91 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 RDXP35241 583 aaKnown RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 ZNF132P52740 706 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 SLC18A1P54219 525 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 NOP14P78316 857 aaKnown RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 ZNF200P98182 395 aaPredicted RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 LONRF1Q17RB8 773 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 IER5Q5VY09 327 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 EFCAB12Q6NXP0 572 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 TMEM270Q6UE05 265 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 CRELD2Q6UXH1 353 aaPredicted RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 TRPM8Q7Z2W7 1104 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 RNF180Q86T96 592 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 CPNE8Q86YQ8 564 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 WDR49Q8IV35 697 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 C11orf70Q9BRQ4 267 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 NINJ2Q9NZG7 142 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 SENP1Q9P0U3 644 aa13.11□□□□□ -0.31
AFF3-215ENST00000498090 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
AFF3-215ENST00000498090 MKI67P46013 3256 aaKnown RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 NRCAMQ92823 1304 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 FAM170AA1A519 330 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 MAGEB2O15479 319 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 MMP8P22894 467 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 KLRC2P26717 231 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 CHKAP35790 457 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 ACLYP53396 1101 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 PIGHQ14442 188 aaPredicted RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 RASA2Q15283 850 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 SNCBQ16143 134 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 IZUMO3Q5VZ72 239 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 CYB5D1Q6P9G0 228 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 CCDC91Q7Z6B0 441 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 TDRPQ86YL5 185 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 CKAP2Q8WWK9 683 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 PRPF31Q8WWY3 499 aaKnown RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 DDX23Q9BUQ8 820 aaKnown RBP13.1□□□□□ -0.31
AFF3-215ENST00000498090 YY1AP1Q9H869 796 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 EFR3BQ9Y2G0 817 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 CNTNAP2Q9UHC6 1331 aa13.1□□□□□ -0.31
AFF3-215ENST00000498090 TMEM191CA6NGB0 347 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 TREHO43280 583 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 OAS1P00973 400 aaKnown RBP13.09□□□□□ -0.31
AFF3-215ENST00000498090 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 EIF4BP23588 611 aaKnown RBP13.09□□□□□ -0.31
AFF3-215ENST00000498090 SLC8A1P32418 973 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 ACOT2P49753 483 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 LAMTOR4Q0VGL1 99 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 NCOA4Q13772 614 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 GSTA5Q7RTV2 222 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 ANKS1BQ7Z6G8 1248 aa13.09□□□□□ -0.31
AFF3-215ENST00000498090 BRSK2Q8IWQ3 736 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms