RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 CDCA2Q69YH5 1023 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 OR6B2Q6IFH4 312 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 C1orf228Q6PIY5 440 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 TSHZ1Q6ZSZ6 1077 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ROPN1BQ9BZX4 212 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ROPN1Q9HAT0 212 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 SLC40A1Q9NP59 571 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 NKIRAS1Q9NYS0 192 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 PPP2R3BQ9Y5P8 575 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 TCRBV7S3A2A0A539 114 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 DNALI1O14645 258 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 HCRTO43612 131 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 MICAL2O94851 1124 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 FSBPO95073 299 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ARF4P18085 180 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 CTCFP49711 727 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 BBS9Q3SYG4 887 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 SYDE1Q6ZW31 735 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 UNC45BQ8IWX7 931 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 UBR7Q8N806 425 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 C7orf31Q8N865 590 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 SLC4A11Q8NBS3 891 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 CCT6BQ92526 530 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 HPDLQ96IR7 371 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ADPGKQ9BRR6 497 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 C2orf40Q9H1Z8 148 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ALG13Q9NP73 1137 aaKnown RBP12.13□□□□□ -0.47
CDCA7-208ENST00000496441 ERAP1Q9NZ08 941 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 HEY1Q9Y5J3 304 aa12.13□□□□□ -0.47
CDCA7-208ENST00000496441 A0A1W2PPM1 405 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 CDH16O75309 829 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 EIF4BP23588 611 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 MIPP30301 263 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 PTPN11Q06124 597 aaPredicted RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 FAXCQ5TGI0 409 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 MIS12Q9H081 205 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 FZD8Q9H461 694 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 C5orf60A6NFR6 353 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 ASAP2O43150 1006 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 HBP1O60381 514 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 LGALS2P05162 132 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 NDST1P52848 882 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 CAV1Q03135 178 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 DNAJC3Q13217 504 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 SESTD1Q86VW0 696 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 KIF2BQ8N4N8 673 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 ZCCHC9Q8N567 271 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 NETO2Q8NC67 525 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 CENPTQ96BT3 561 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 PTPRHQ9HD43 1115 aa12.12□□□□□ -0.47
CDCA7-208ENST00000496441 NGRNQ9NPE2 291 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 MYO18AQ92614 2054 aaKnown RBP12.12□□□□□ -0.47
CDCA7-208ENST00000496441 E5RJQ4 531 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 PPEF2O14830 753 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 AVILO75366 819 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 RNF8O76064 485 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 C22orf31O95567 290 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 ATP5DP30049 168 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 AP3M2P53677 418 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 CDH6P55285 790 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 MYO1EQ12965 1108 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 HADHQ16836 314 aaKnown RBP12.11□□□□□ -0.47
CDCA7-208ENST00000496441 SLC10A6Q3KNW5 377 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 PPP6R3Q5H9R7 873 aaPredicted RBP12.11□□□□□ -0.47
CDCA7-208ENST00000496441 FNBP1LQ5T0N5 605 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
CDCA7-208ENST00000496441 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 XYLT1Q86Y38 959 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 SCUBE3Q8IX30 993 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 TMEM176AQ96HP8 235 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 UBOX5O94941 541 aa12.11□□□□□ -0.47
CDCA7-208ENST00000496441 CA4P22748 312 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms