RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
CBX4-204ENST00000495122 H3BNC9 293 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 M0QZ92 97 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 ENPP3O14638 875 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 SPOPO43791 374 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 COMTP21964 271 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 CD52P31358 61 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 PEX5P50542 639 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 MESDQ14696 234 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 SLC10A6Q3KNW5 377 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 NAA35Q5VZE5 725 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 JADE1Q6IE81 842 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 CATSPER4Q7RTX7 472 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 TMEM192Q8IY95 271 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 CEP120Q8N960 986 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 C1orf127Q8N9H9 656 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 CAVIN3Q969G5 261 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 MRPL38Q96DV4 380 aaKnown RBP17.23■□□□□ 0.35
CBX4-204ENST00000495122 NECAB3Q96P71 396 aaPredicted RBP17.23■□□□□ 0.35
CBX4-204ENST00000495122 CELF4Q9BZC1 486 aaKnown RBP17.23■□□□□ 0.35
CBX4-204ENST00000495122 GOLPH3Q9H4A6 298 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 ACP6Q9NPH0 428 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 PARVAQ9NVD7 372 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 ADAM22Q9P0K1 906 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 STRIP2Q9ULQ0 834 aa17.23■□□□□ 0.35
CBX4-204ENST00000495122 CITO14578 2027 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 BHMG1C9JSJ3 638 aaPredicted RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 MYO1FO00160 1098 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 XPOTO43592 962 aaKnown RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 NFICP08651 508 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 MMP8P22894 467 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 POLR2BP30876 1174 aaKnown RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 GBP1P32455 592 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 DNA2P51530 1060 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 GSCP56915 257 aaPredicted RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 RWDD2BP57060 319 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 DHX34Q14147 1143 aaKnown RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 CASP8Q14790 479 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 STILQ15468 1287 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 CXorf38Q8TB03 319 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 ZNF689Q96CS4 500 aaPredicted RBP17.22■□□□□ 0.35
CBX4-204ENST00000495122 CYFIP2Q96F07 1278 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 KRT12Q99456 494 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 DNAI2Q9GZS0 605 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 EHD2Q9NZN4 543 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 ANAPC7Q9UJX3 599 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 C5orf42Q9H799 3197 aa17.22■□□□□ 0.35
CBX4-204ENST00000495122 FAM187AA6NFU0 413 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 PSTPIP1O43586 416 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 PROSCO94903 275 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 HEXIM1O94992 359 aaKnown RBP17.21■□□□□ 0.35
CBX4-204ENST00000495122 FGGP02679 453 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 CRYBB1P53674 252 aaPredicted RBP17.21■□□□□ 0.35
CBX4-204ENST00000495122 OSTNP61366 133 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 GABPB1Q06547 395 aaPredicted RBP17.21■□□□□ 0.35
CBX4-204ENST00000495122 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 MYO1EQ12965 1108 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 GPM6BQ13491 265 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 RTN4RL1Q86UN2 441 aaPredicted RBP17.21■□□□□ 0.35
CBX4-204ENST00000495122 CRIPAKQ8N1N5 446 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 LRRC52Q8N7C0 313 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 FTHL17Q9BXU8 183 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 MIS12Q9H081 205 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 MED4Q9NPJ6 270 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 SMARCAL1Q9NZC9 954 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 WDR35Q9P2L0 1181 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 DMGDHQ9UI17 866 aaKnown RBP17.21■□□□□ 0.35
CBX4-204ENST00000495122 PADI3Q9ULW8 664 aa17.21■□□□□ 0.35
CBX4-204ENST00000495122 C5orf67F2Z3F1 127 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 SART1O43290 800 aaKnown RBP17.2■□□□□ 0.34
CBX4-204ENST00000495122 DGKIO75912 1065 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 SASH3O75995 380 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 ITGB3P05106 788 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
CBX4-204ENST00000495122 RRM1P23921 792 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 CHRNA3P32297 505 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 CTNNB1P35222 781 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 PLA2G4AP47712 749 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 PTPROQ16827 1216 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 KIZQ2M2Z5 673 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 TIGD5Q53EQ6 642 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 DCAF12L1Q5VU92 463 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 BEST2Q8NFU1 509 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 CPA5Q8WXQ8 436 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 SEC14L1Q92503 715 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 CLP1Q92989 425 aaKnown RBP17.2■□□□□ 0.34
CBX4-204ENST00000495122 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
CBX4-204ENST00000495122 SNX27Q96L92 541 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 FAM129AQ9BZQ8 928 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 RAB17Q9H0T7 212 aa17.2■□□□□ 0.34
CBX4-204ENST00000495122 UBE2ZQ9H832 354 aaPredicted RBP17.2■□□□□ 0.34
CBX4-204ENST00000495122 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
CBX4-204ENST00000495122 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms