RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNX17-209ENST00000494893 CDH7Q9ULB5 785 aa18.27■□□□□ 0.52
SNX17-209ENST00000494893 MRPS23Q9Y3D9 190 aaKnown RBP18.27■□□□□ 0.52
SNX17-209ENST00000494893 DOCK8Q8NF50 2099 aa18.27■□□□□ 0.51
SNX17-209ENST00000494893 TRIOO75962 3097 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 CLSTN1O94985 981 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 HMGA1P17096 107 aaKnown RBP18.26■□□□□ 0.51
SNX17-209ENST00000494893 GJA1P17302 382 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 ERCC5P28715 1186 aaPredicted RBP18.26■□□□□ 0.51
SNX17-209ENST00000494893 NDST1P52848 882 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 CACNA2D1P54289 1103 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 EPHB3P54753 998 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 INCA1Q0VD86 236 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 DDR2Q16832 855 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 PAQR9Q6ZVX9 377 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 SPATA2LQ8IUW3 424 aaPredicted RBP18.26■□□□□ 0.51
SNX17-209ENST00000494893 ELMOD1Q8N336 334 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 B3GALNT2Q8NCR0 500 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 LMO3Q8TAP4 145 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 SHKBP1Q8TBC3 707 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 WHAMMQ8TF30 809 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 FUBP3Q96I24 572 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNX17-209ENST00000494893 CNOT6LQ96LI5 555 aaKnown RBP18.26■□□□□ 0.51
SNX17-209ENST00000494893 ARID3AQ99856 593 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 IL21Q9HBE4 155 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 CBX8Q9HC52 389 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 ASB3Q9Y575 518 aa18.26■□□□□ 0.51
SNX17-209ENST00000494893 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 CLDN5O00501 218 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 PMM2O15305 246 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 DCXO43602 365 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 GNA14O95837 355 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 MYL4P12829 197 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 P4HA1P13674 534 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 BDNFP23560 247 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 MAGEA11P43364 429 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 MTMR3Q13615 1198 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 PTPN21Q16825 1174 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 IQCEQ6IPM2 695 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 GAREM2Q75VX8 874 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 ACOT1Q86TX2 421 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 RNF214Q8ND24 703 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 IMPG2Q9BZV3 1241 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 ZNF518BQ9C0D4 1074 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 KCNK12Q9HB15 430 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 CYP3A43Q9HB55 503 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 ASAH2Q9NR71 780 aa18.25■□□□□ 0.51
SNX17-209ENST00000494893 ANHXE9PGG2 379 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 CILPO75339 1184 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 CYP27A1Q02318 531 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 KCNH2Q12809 1159 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 HTR4Q13639 388 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 IQCB1Q15051 598 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 C4orf50Q6ZRC1 276 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 PDZD4Q76G19 769 aaPredicted RBP18.24■□□□□ 0.51
SNX17-209ENST00000494893 CRYBG2Q8N1P7 616 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 FGF14Q92915 247 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 MCRS1Q96EZ8 462 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 ZSWIM3Q96MP5 696 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 RPP25Q9BUL9 199 aaKnown RBP18.24■□□□□ 0.51
SNX17-209ENST00000494893 ELOVL4Q9GZR5 314 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 C11orf16Q9NQ32 467 aa18.24■□□□□ 0.51
SNX17-209ENST00000494893 MAGEC2Q9UBF1 373 aaPredicted RBP18.24■□□□□ 0.51
SNX17-209ENST00000494893 A0A1W2PRU2 124 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 MICAL2O94851 1124 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 CD58P19256 250 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 TEAD2Q15562 447 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 MAPRE1Q15691 268 aaKnown RBP18.23■□□□□ 0.51
SNX17-209ENST00000494893 STXBP5Q5T5C0 1151 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 PARM1Q6UWI2 310 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 TMEM150AQ86TG1 271 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 UNC93AQ86WB7 457 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 SCN4BQ8IWT1 228 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 FUKQ8N0W3 1084 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 UBR7Q8N806 425 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 C12orf29Q8N999 325 aa18.23■□□□□ 0.51
SNX17-209ENST00000494893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNX17-209ENST00000494893 ZFP37Q9Y6Q3 630 aaPredicted RBP18.23■□□□□ 0.51
SNX17-209ENST00000494893 PTPRDP23468 1912 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 SLC38A8A6NNN8 435 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 ZNF197O14709 1029 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 NOL4O94818 638 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 FGFR1OPO95684 399 aaKnown RBP18.22■□□□□ 0.51
SNX17-209ENST00000494893 AFPP02771 609 aaKnown RBP18.22■□□□□ 0.51
SNX17-209ENST00000494893 CCDC130P13994 396 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 FCARP24071 287 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 RPL10AP62906 217 aaKnown RBP18.22■□□□□ 0.51
SNX17-209ENST00000494893 ZXDAP98168 799 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 LRMPQ12912 555 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 CYP4A22Q5TCH4 519 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 VSTM1Q6UX27 236 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 FAM35AQ86V20 835 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 LUZP1Q86V48 1076 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 DHX40Q8IX18 779 aaKnown RBP18.22■□□□□ 0.51
SNX17-209ENST00000494893 LEMD2Q8NC56 503 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 CCDC150Q8NCX0 1101 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 FAXDC2Q96IV6 333 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms