RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 DPH6Q7L8W6 267 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 OSTM1Q86WC4 334 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 ADGRF2Q8IZF7 708 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 STKLD1Q8NE28 680 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 ANKRD36BP1Q96IX9 119 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 MYRFLQ96LU7 910 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 RTKNQ9BST9 563 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 LRRC27Q9C0I9 530 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 EBF3Q9H4W6 596 aa24.94■■□□□ 1.58
COL27A1-208ENST00000494780 R3HCC1Q9Y3T6 440 aaKnown RBP24.94■■□□□ 1.58
COL27A1-208ENST00000494780 AMPD2Q01433 879 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 GRSF1Q12849 480 aaKnown RBP eCLIP24.93■■□□□ 1.58
COL27A1-208ENST00000494780 MYO1EQ12965 1108 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 SRSF5Q13243 272 aaKnown RBP24.93■■□□□ 1.58
COL27A1-208ENST00000494780 SURF1Q15526 300 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 TRIM68Q6AZZ1 485 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 CC2D1AQ6P1N0 951 aaPredicted RBP24.93■■□□□ 1.58
COL27A1-208ENST00000494780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.93■■□□□ 1.58
COL27A1-208ENST00000494780 WDR5BQ86VZ2 330 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 SPATA2LQ8IUW3 424 aaPredicted RBP24.93■■□□□ 1.58
COL27A1-208ENST00000494780 PDILTQ8N807 584 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 FUBP3Q96I24 572 aaKnown RBP eCLIP24.93■■□□□ 1.58
COL27A1-208ENST00000494780 FAM84AQ96KN4 292 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 TNMDQ9H2S6 317 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 INTS13Q9NVM9 706 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 NCOR2Q9Y618 2525 aa24.93■■□□□ 1.58
COL27A1-208ENST00000494780 OBSL1O75147 1896 aa24.92■■□□□ 1.58
COL27A1-208ENST00000494780 TRDMT1O14717 391 aaKnown RBP24.92■■□□□ 1.58
COL27A1-208ENST00000494780 TADA3O75528 432 aa24.92■■□□□ 1.58
COL27A1-208ENST00000494780 PDGFRLQ15198 375 aa24.92■■□□□ 1.58
COL27A1-208ENST00000494780 SOWAHAQ2M3V2 549 aa24.92■■□□□ 1.58
COL27A1-208ENST00000494780 FSTL4Q6MZW2 842 aa24.92■■□□□ 1.58
COL27A1-208ENST00000494780 OTOL1A6NHN0 477 aaPredicted RBP24.91■■□□□ 1.58
COL27A1-208ENST00000494780 ZNF233A6NK53 670 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 STX6O43752 255 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 ATG13O75143 517 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 TNNC2P02585 160 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 STK38Q15208 465 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 FAM171BQ6P995 826 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 LINC00301Q8NCQ3 95 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 RIN3Q8TB24 985 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 CHFRQ96EP1 664 aa24.91■■□□□ 1.58
COL27A1-208ENST00000494780 MAGEA11P43364 429 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 FAM160A1Q05DH4 1040 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 CSRP2Q16527 193 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 DUOXA2Q1HG44 320 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 LMBRD2Q68DH5 695 aaPredicted RBP24.9■■□□□ 1.58
COL27A1-208ENST00000494780 C4orf50Q6ZRC1 276 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 CEP68Q76N32 757 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 LIMS2Q7Z4I7 341 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 SCN4BQ8IWT1 228 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 OR5B17Q8NGF7 314 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 NETO1Q8TDF5 533 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 HPDLQ96IR7 371 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 CUEDC2Q9H467 287 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 KIAA1586Q9HCI6 787 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 SEMA4GQ9NTN9 838 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 KBTBD4Q9NVX7 518 aa24.9■■□□□ 1.58
COL27A1-208ENST00000494780 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.9■■□□□ 1.58
COL27A1-208ENST00000494780 ZNF638Q14966 1978 aaKnown RBP24.9■■□□□ 1.58
COL27A1-208ENST00000494780 PTPRJQ12913 1337 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 TRAV19A0A0A6YYK7 116 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 CCDC163A0A0D9SF12 145 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 HCRTO43612 131 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 USP17L7P0C7H9 530 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 ARSAP15289 507 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 MTF1Q14872 753 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 E2F4Q16254 413 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 CCDC142Q17RM4 750 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 PKN3Q6P5Z2 889 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 CBWD2Q8IUF1 395 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 FSIP1Q8NA03 581 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 GLIS3Q8NEA6 775 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 EXOC4Q96A65 974 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 SYT15Q9BQS2 421 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 TRIM9Q9C026 710 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 TRPC7Q9HCX4 862 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 HSPBP1Q9NZL4 362 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 CDH9Q9ULB4 789 aa24.89■■□□□ 1.58
COL27A1-208ENST00000494780 SPTLC2O15270 562 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 EIF3DO15371 548 aaKnown RBP eCLIP24.88■■□□□ 1.579e-9■□□□□ 9.5
COL27A1-208ENST00000494780 FOXD2O60548 495 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-208ENST00000494780 AMPD3Q01432 767 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 MAPRE1Q15691 268 aaKnown RBP24.88■■□□□ 1.57
COL27A1-208ENST00000494780 WDR49Q8IV35 697 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 CPA6Q8N4T0 437 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 FAM160A2Q8N612 972 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-208ENST00000494780 OSCP1Q8WVF1 389 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 KBTBD7Q8WVZ9 684 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 HPS3Q969F9 1004 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 CEP295NLQ96MC4 621 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 FOXD4L1Q9NU39 408 aa24.88■■□□□ 1.57
COL27A1-208ENST00000494780 MAGEC2Q9UBF1 373 aaPredicted RBP24.88■■□□□ 1.57
COL27A1-208ENST00000494780 DCDC2BA2VCK2 349 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 PPP6R2O75170 966 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 CKMP06732 381 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 DRD1P21728 446 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 HOXC13P31276 330 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 HOXD13P35453 343 aa24.87■■□□□ 1.57
COL27A1-208ENST00000494780 USP4Q13107 963 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms