RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 ZNF75DP51815 510 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 RAD23BP54727 409 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 EPHB3P54753 998 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 RPL10AP62906 217 aaKnown RBP8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-214ENST00000493786 TAF12Q16514 161 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CFAP221Q4G0U5 840 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 PPM1LQ5SGD2 360 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SFMBT2Q5VUG0 894 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 FAM171BQ6P995 826 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SPATA31D4Q6ZUB0 917 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 RTL10Q7L3V2 364 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 FAM35AQ86V20 835 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 VSTM4Q8IW00 320 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SCN4BQ8IWT1 228 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 UBR7Q8N806 425 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SLC4A11Q8NBS3 891 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 ATAD1Q8NBU5 361 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SLC7A14Q8TBB6 771 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SLC2A14Q8TDB8 520 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SLC22A17Q8WUG5 538 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CPLX3Q8WVH0 158 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 PPM1EQ8WY54 764 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CYFIP2Q96F07 1278 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SMARCD1Q96GM5 515 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 PCED1BQ96HM7 432 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 TWNKQ96RR1 684 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 NAA15Q9BXJ9 866 aaKnown RBP8.07□□□□□ -1.12
VEGFA-214ENST00000493786 SFXN1Q9H9B4 322 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 GRPEL1Q9HAV7 217 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CRTAC1Q9NQ79 661 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 ZNHIT6Q9NWK9 470 aaKnown RBP8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CLDND1Q9NY35 253 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 FBXW11Q9UKB1 542 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 AJAP1Q9UKB5 411 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-214ENST00000493786 MYO6Q9UM54 1294 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CNTN6Q9UQ52 1028 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 LUC7L2Q9Y383 392 aaKnown RBP8.07□□□□□ -1.12
VEGFA-214ENST00000493786 CEP83Q9Y592 693 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 INSL5Q9Y5Q6 135 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 HCFC2Q9Y5Z7 792 aa8.07□□□□□ -1.12
VEGFA-214ENST00000493786 TSC2P49815 1807 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 VWA8A3KMH1 1905 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 LRRC53A6NM62 1247 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 M0QYV0 167 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ZMYND10O75800 440 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 AP1G2O75843 785 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ADCY5O95622 1261 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 HNRNPA1P09651 372 aaKnown RBP eCLIP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 HAPLN1P10915 354 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 CCDC130P13994 396 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 FERP16591 822 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 HOXB8P17481 243 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 BDNFP23560 247 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 BRD2P25440 801 aaKnown RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 GTF2F1P35269 517 aaKnown RBP eCLIP8.06□□□□□ -1.124e-25■■■■■ 91
VEGFA-214ENST00000493786 PBX1P40424 430 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 MAGEA11P43364 429 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 MRE11P49959 708 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 CDR1P51861 262 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ZNF132P52740 706 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 BCAT1P54687 386 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 JAM2P57087 298 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ZBED6P86452 979 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ARID5AQ03989 594 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 DUSP4Q13115 394 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ASIC2Q16515 512 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 GOLGA7BQ2TAP0 167 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 PPP1R26Q5T8A7 1209 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ARHGAP17Q68EM7 881 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 DPY19L2P1Q6NXN4 242 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 LILRA6Q6PI73 481 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 VSTM1Q6UX27 236 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ITIH5Q86UX2 942 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 LRRTM3Q86VH5 581 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 CNGA4Q8IV77 575 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 TCEAL8Q8IYN2 117 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 FAM71AQ8IYT1 594 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 C12orf29Q8N999 325 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 PABPC5Q96DU9 382 aaKnown RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 PKMYT1Q99640 499 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 HNRNPABQ99729 332 aaKnown RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 B3GNT5Q9BYG0 378 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ZNF518BQ9C0D4 1074 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 PIDD1Q9HB75 910 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 DMAP1Q9NPF5 467 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-214ENST00000493786 KRT82Q9NSB4 513 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 TMLHEQ9NVH6 421 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 ZDHHC7Q9NXF8 308 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 EHD2Q9NZN4 543 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 CAPN11Q9UMQ6 739 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 YIPF1Q9Y548 306 aa8.06□□□□□ -1.12
VEGFA-214ENST00000493786 MYO9BQ13459 2157 aa8.05□□□□□ -1.12
VEGFA-214ENST00000493786 AKR1B15C9JRZ8 316 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
VEGFA-214ENST00000493786 CLDN5O00501 218 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms