RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SEMA4GQ9NTN9 838 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 PANK4Q9NVE7 773 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 UXTQ9UBK9 157 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 GTF3C4Q9UKN8 822 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 SNX9Q9Y5X1 595 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 MYOFQ9NZM1 2061 aa11.03□□□□□ -0.64
NUDCD3-210ENST00000493613 A0A087X0B3 334 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 FRMD3A2A2Y4 597 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TADA3O75528 432 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 HOXA6P31267 233 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 LHX1P48742 406 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 AMPD2Q01433 879 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 GRSF1Q12849 480 aaKnown RBP eCLIP11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 SLC39A14Q15043 492 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 CSRP2Q16527 193 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 SCARA3Q6AZY7 606 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 FSTL4Q6MZW2 842 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 PRR23CQ6ZRP0 262 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 MON1AQ86VX9 555 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 WDR5BQ86VZ2 330 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 SPATA2LQ8IUW3 424 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 ADGRF2Q8IZF7 708 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 GPD1LQ8N335 351 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 FAM160A2Q8N612 972 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TOP6BLQ8N6T0 577 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 PDILTQ8N807 584 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TTC16Q8NEE8 873 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 RIN3Q8TB24 985 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 NETO1Q8TDF5 533 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 CHFRQ96EP1 664 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 USP28Q96RU2 1077 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 PKMYT1Q99640 499 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TMEM206Q9H813 350 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TRPC7Q9HCX4 862 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 MTMR6Q9Y217 621 aa11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-210ENST00000493613 TRDMT1O14717 391 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 HCRTO43612 131 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 ATG13O75143 517 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 NOL4O94818 638 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 PRPF6O94906 941 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 CKMP06732 381 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 USP17L7P0C7H9 530 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 ARSAP15289 507 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 PCSK1P29120 753 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 PXNP49023 591 aaPredicted RBP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 RBP5P82980 135 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 MYO1EQ12965 1108 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 ZNF268Q14587 947 aaPredicted RBP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 PDGFRLQ15198 375 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 CCDC142Q17RM4 750 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 SOWAHAQ2M3V2 549 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 CFAP221Q4G0U5 840 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 LMBRD2Q68DH5 695 aaPredicted RBP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 OSTM1Q86WC4 334 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 SCN4BQ8IWT1 228 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 CCDC65Q8IXS2 484 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 CPA6Q8N4T0 437 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 SPATA18Q8TC71 538 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 INTS4Q96HW7 963 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 FUBP3Q96I24 572 aaKnown RBP eCLIP11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 ANKRD36BP1Q96IX9 119 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 MYRFLQ96LU7 910 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 CYP2S1Q96SQ9 504 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 SLC8A2Q9UPR5 921 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 PTPRJQ12913 1337 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 PLXND1Q9Y4D7 1925 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 SPTBN2O15020 2390 aa11.01□□□□□ -0.65
NUDCD3-210ENST00000493613 TRAV19A0A0A6YYK7 116 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 GABRDO14764 452 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 SLC30A4O14863 429 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 KIAA0391O15091 583 aaKnown RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 STX6O43752 255 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 GDF9O60383 454 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 FOXD2O60548 495 aaPredicted RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 RNF40O75150 1001 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 RPP40O75818 363 aaKnown RBP11□□□□□ -0.65
NUDCD3-210ENST00000493613 EGFP01133 1207 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 TNNC2P02585 160 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 CCDC192P0DO97 292 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 DRD1P21728 446 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 GJA4P35212 333 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 FAM160A1Q05DH4 1040 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 MTF1Q14872 753 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 STK38Q15208 465 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 C4orf50Q6ZRC1 276 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 STXBP4Q6ZWJ1 553 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 DPH6Q7L8W6 267 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 FSIP1Q8NA03 581 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 GLIS3Q8NEA6 775 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 OR5B17Q8NGF7 314 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 OSCP1Q8WVF1 389 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 GAB3Q8WWW8 586 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 HPS3Q969F9 1004 aa11□□□□□ -0.65
NUDCD3-210ENST00000493613 EXOC4Q96A65 974 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms