RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 WASP42768 502 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 FKBP1AP62942 108 aaKnown RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 MGAT2Q10469 447 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 FOXL1Q12952 345 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 ICAM4Q14773 271 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 NOMO1Q15155 1222 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 SHROOM1Q2M3G4 852 aaPredicted RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 PDZD4Q76G19 769 aaPredicted RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 LPIN2Q92539 896 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 EDC3Q96F86 508 aaKnown RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 BORCS6Q96GS4 357 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 ENKD1Q9H0I2 346 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 DEF6Q9H4E7 631 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 TDRD3Q9H7E2 651 aaKnown RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 DDX4Q9NQI0 724 aaKnown RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 PIH1D3Q9NQM4 214 aaKnown RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 AASDHPPTQ9NRN7 309 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 SMPD4Q9NXE4 827 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 HMG20BQ9P0W2 317 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 TCAF1Q9Y4C2 921 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 TRIM17Q9Y577 477 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
CCNB3-208ENST00000493507 RBBP6Q7Z6E9 1792 aaKnown RBP5.88□□□□□ -1.47
CCNB3-208ENST00000493507 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 SMIM22K7EJ46 135 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 ITGA10O75578 1167 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 ENDOD1O94919 500 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 C5AR1P21730 350 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 IL15P40933 162 aaPredicted RBP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 GZMKP49863 264 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 FXR1P51114 621 aaKnown RBP eCLIP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 RRP1P56182 461 aaKnown RBP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 PPP3CAQ08209 521 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 RRP1BQ14684 758 aaKnown RBP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 TTF1Q15361 905 aaPredicted RBP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 PLEKHG6Q3KR16 790 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 FKBP15Q5T1M5 1219 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 D2HGDHQ8N465 521 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 CD99L2Q8TCZ2 262 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 OTUD7AQ8TE49 926 aaPredicted RBP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 IL17RAQ96F46 866 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 TMEM39BQ9GZU3 492 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 EPC1Q9H2F5 836 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 BCO1Q9HAY6 547 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 CD248Q9HCU0 757 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 IL1RAPL2Q9NP60 686 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 DMRT3Q9NQL9 472 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 ZNF70Q9UC06 446 aaPredicted RBP5.87□□□□□ -1.47
CCNB3-208ENST00000493507 GAKO14976 1311 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 MYO3BQ8WXR4 1341 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 SALL1Q9NSC2 1324 aa5.87□□□□□ -1.47
CCNB3-208ENST00000493507 COL11A1P12107 1806 aaPredicted RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 RPAP1Q9BWH6 1393 aaPredicted RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 SALL3Q9BXA9 1300 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 E2F8A0AVK6 867 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 TCP10L2B9ZVM9 353 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 IPO8O15397 1037 aaKnown RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 HOXA3O43365 443 aaPredicted RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 S100BP04271 92 aaPredicted RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 SLC5A1P13866 664 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 EPHB1P54762 984 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 ADKP55263 362 aaKnown RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 PER3P56645 1201 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 RHBDL3P58872 404 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 APBA1Q02410 837 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 SREBF2Q12772 1141 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 MRPL49Q13405 166 aaKnown RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 ODF1Q14990 250 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 SPATS1Q496A3 300 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 TMEM240Q5SV17 173 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 FTSJ3Q8IY81 847 aaKnown RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 ANKRD35Q8N283 1001 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 OR7D4Q8NG98 312 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 EDAQ92838 391 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 ZNF512Q96ME7 567 aaPredicted RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 C7orf25Q9BPX7 421 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 DEFB129Q9H1M3 183 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 TCF7L1Q9HCS4 588 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 TRPS1Q9UHF7 1281 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 TUBD1Q9UJT1 453 aa5.86□□□□□ -1.47
CCNB3-208ENST00000493507 LUC7L2Q9Y383 392 aaKnown RBP5.86□□□□□ -1.47
CCNB3-208ENST00000493507 FRMPD3Q5JV73 1810 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 PDS5AQ29RF7 1337 aaKnown RBP5.85□□□□□ -1.47
CCNB3-208ENST00000493507 MANSC4A6NHS7 340 aaPredicted RBP5.85□□□□□ -1.47
CCNB3-208ENST00000493507 MFAP3LO75121 409 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 WDHD1O75717 1129 aaPredicted RBP5.85□□□□□ -1.47
CCNB3-208ENST00000493507 GNAT2P19087 354 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 VCAM1P19320 739 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 ACO1P21399 889 aaKnown RBP5.85□□□□□ -1.47
CCNB3-208ENST00000493507 NF2P35240 595 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 MAGEA10P43363 369 aaPredicted RBP5.85□□□□□ -1.47
CCNB3-208ENST00000493507 SELENOPP49908 381 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 INHBEP58166 350 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 EFEMP1Q12805 493 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 CRHR2Q13324 411 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 ODR4Q5SWX8 454 aa5.85□□□□□ -1.47
CCNB3-208ENST00000493507 CDC42EP5Q6NZY7 148 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms