RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 NME7Q9Y5B8 376 aa11.37□□□□□ -0.59
CDC42SE1-206ENST00000492796 NUMBLQ9Y6R0 609 aa11.37□□□□□ -0.59
CDC42SE1-206ENST00000492796 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE1-206ENST00000492796 ATP8B3O60423 1300 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 OBSL1O75147 1896 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 TRIM66O15016 1216 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 PMM2O15305 246 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 ATP2C2O75185 946 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 MOSPD3O75425 235 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 PTPN1P18031 435 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CYP2F1P24903 491 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 RAP1GAPP47736 663 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CDH8P55286 799 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 STX17P56962 302 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CYP27A1Q02318 531 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 INCA1Q0VD86 236 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CCDC142Q17RM4 750 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CBWD6Q4V339 395 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CBWD3Q5JTY5 395 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 CBWD5Q5RIA9 395 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 SPOPLQ6IQ16 392 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 PARM1Q6UWI2 310 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 TTC39CQ8N584 583 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 SHKBP1Q8TBC3 707 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 TRMT2BQ96GJ1 504 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 SPATA17Q96L03 361 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 ELOVL4Q9GZR5 314 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 DPEP3Q9H4B8 488 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 APOBEC3GQ9HC16 384 aaKnown RBP11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 RAB20Q9NX57 234 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 UXTQ9UBK9 157 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 COQ4Q9Y3A0 265 aa11.36□□□□□ -0.59
CDC42SE1-206ENST00000492796 DENND4CQ5VZ89 1909 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 TMEM221A6NGB7 291 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 M0R296 226 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 P4HA2O15460 535 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 ECI2O75521 394 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 NOL4O94818 638 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 MBD3O95983 291 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 CCDC192P0DO97 292 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 SRFP11831 508 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 HMGA1P17096 107 aaKnown RBP11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 ANXA13P27216 316 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 GABRR2P28476 465 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 FMO5P49326 533 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 CDR1P51861 262 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 CETN1Q12798 172 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 TEAD2Q15562 447 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 DDR2Q16832 855 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 ARHGAP15Q53QZ3 475 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 WDR44Q5JSH3 913 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 GAREM2Q75VX8 874 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 BMP8AQ7Z5Y6 402 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 SCN4BQ8IWT1 228 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 SLC44A3Q8N4M1 653 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 GPT2Q8TD30 523 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 RSAD2Q8WXG1 361 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 FGF14Q92915 247 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 MCRS1Q96EZ8 462 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 MYRFLQ96LU7 910 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 ATXN3LQ9H3M9 355 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 ZNF334Q9HCZ1 680 aaPredicted RBP11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 EHD2Q9NZN4 543 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 GREB1Q4ZG55 1949 aa11.35□□□□□ -0.59
CDC42SE1-206ENST00000492796 MYO10Q9HD67 2058 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 SOBPA7XYQ1 873 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 CILPO75339 1184 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 GJA1P17302 382 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 BDNFP23560 247 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 DDX6P26196 483 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 GRIK1P39086 918 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 GPR15P49685 360 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 NDST1P52848 882 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 NLRP12P59046 1061 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 CT47A1Q5JQC4 288 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 CRYBG2Q8N1P7 616 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 ZSCAN18Q8TBC5 510 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 SEMA4DQ92854 862 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 SMARCD2Q92925 531 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 E2F7Q96AV8 911 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 ELMO3Q96BJ8 720 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 C8orf48Q96LL4 319 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 ASB16Q96NS5 453 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 LRFN3Q9BTN0 628 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 NT5C1AQ9BXI3 368 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 SRRTQ9BXP5 876 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms