RNA–Protein interactions for RNA: ENST00000492271.1

TCEA3-206, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-206ENST00000492271 CUEDC2Q9H467 287 aa18.5■□□□□ 0.55
TCEA3-206ENST00000492271 PARD6AQ9NPB6 346 aa18.5■□□□□ 0.55
TCEA3-206ENST00000492271 GTF3C4Q9UKN8 822 aa18.5■□□□□ 0.55
TCEA3-206ENST00000492271 SPTBN2O15020 2390 aa18.5■□□□□ 0.55
TCEA3-206ENST00000492271 EIF3DO15371 548 aaKnown RBP eCLIP18.49■□□□□ 0.55
TCEA3-206ENST00000492271 YEATS4O95619 227 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 KRT19P08727 400 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 HOXC13P31276 330 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 PUM1Q14671 1186 aaKnown RBP eCLIP18.49■□□□□ 0.55
TCEA3-206ENST00000492271 ITPRIPL2Q3MIP1 535 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 FAM171BQ6P995 826 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 MON1AQ86VX9 555 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 NOC3LQ8WTT2 800 aaKnown RBP18.49■□□□□ 0.55
TCEA3-206ENST00000492271 GKN1Q9NS71 199 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 HSPBP1Q9NZL4 362 aa18.49■□□□□ 0.55
TCEA3-206ENST00000492271 TFIP11Q9UBB9 837 aaKnown RBP18.49■□□□□ 0.55
TCEA3-206ENST00000492271 MED19A0JLT2 244 aaPredicted RBP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 TGFB1I1O43294 461 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 ATP2C2O75185 946 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 PCSK1P29120 753 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 AVPR1AP37288 418 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 LHX1P48742 406 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 RPL10AP62906 217 aaKnown RBP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 ZNF268Q14587 947 aaPredicted RBP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 TMEM196Q5HYL7 178 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 TRIM68Q6AZZ1 485 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 STXBP4Q6ZWJ1 553 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 SYNPOQ8N3V7 929 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 ZNF507Q8TCN5 953 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 DHX58Q96C10 678 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 FUBP3Q96I24 572 aaKnown RBP eCLIP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 HPDLQ96IR7 371 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 ANKRD36BP1Q96IX9 119 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 GZF1Q9H116 711 aaPredicted RBP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 KIF9Q9HAQ2 790 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 TDP1Q9NUW8 608 aa18.48■□□□□ 0.55
TCEA3-206ENST00000492271 THG1LQ9NWX6 298 aaKnown RBP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 MAGED2Q9UNF1 606 aaPredicted RBP18.48■□□□□ 0.55
TCEA3-206ENST00000492271 CHURC1-FNTBB4DL54 471 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 HRO43593 1189 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 CUTAO60888 179 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 LMO2P25791 158 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 HOXA6P31267 233 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 MAGEA11P43364 429 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 FNTBP49356 437 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 ASIC1P78348 528 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 RUNX3Q13761 415 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 RSPO4Q2I0M5 234 aaPredicted RBP18.47■□□□□ 0.55
TCEA3-206ENST00000492271 FAM26FQ5R3K3 315 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 PKN3Q6P5Z2 889 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 DPH6Q7L8W6 267 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 DGLUCYQ7Z3D6 616 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 WDR49Q8IV35 697 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 GPR161Q8N6U8 529 aaKnown RBP18.47■□□□□ 0.55
TCEA3-206ENST00000492271 MRPS31Q92665 395 aaKnown RBP18.47■□□□□ 0.55
TCEA3-206ENST00000492271 SNX21Q969T3 373 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 ZNF396Q96N95 335 aaPredicted RBP18.47■□□□□ 0.55
TCEA3-206ENST00000492271 SLC22A12Q96S37 553 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 C7orf25Q9BPX7 421 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 LRRC27Q9C0I9 530 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 EBF3Q9H4W6 596 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 CRTAC1Q9NQ79 661 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 AGPAT3Q9NRZ7 376 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 NME7Q9Y5B8 376 aa18.47■□□□□ 0.55
TCEA3-206ENST00000492271 TULP1O00294 542 aaPredicted RBP18.46■□□□□ 0.55
TCEA3-206ENST00000492271 ARSAP15289 507 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 PSMC1P62191 440 aaKnown RBP18.46■□□□□ 0.55
TCEA3-206ENST00000492271 MYO1EQ12965 1108 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 USP4Q13107 963 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SRSF5Q13243 272 aaKnown RBP18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SURF1Q15526 300 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 ZNF77Q15935 545 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SNRNP35Q16560 246 aaKnown RBP18.46■□□□□ 0.55
TCEA3-206ENST00000492271 LPAL2Q16609 132 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 DUOXA2Q1HG44 320 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 LAIR1Q6GTX8 287 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 FSTL4Q6MZW2 842 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 IQUBQ8NA54 791 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SCFD1Q8WVM8 642 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SECISBP2LQ93073 1101 aaKnown RBP18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SYT15Q9BQS2 421 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 GCNT4Q9P109 453 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 UXTQ9UBK9 157 aaPredicted RBP18.46■□□□□ 0.55
TCEA3-206ENST00000492271 UBE4BO95155 1302 aa18.46■□□□□ 0.55
TCEA3-206ENST00000492271 SDK1Q7Z5N4 2213 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 TRDMT1O14717 391 aaKnown RBP18.45■□□□□ 0.54
TCEA3-206ENST00000492271 TNNC2P02585 160 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 WARSP23381 471 aaKnown RBP18.45■□□□□ 0.54
TCEA3-206ENST00000492271 CASP1P29466 404 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 UNC13DQ70J99 1090 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 TRAPPC11Q7Z392 1133 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 LONP2Q86WA8 852 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 SPATA2LQ8IUW3 424 aaPredicted RBP18.45■□□□□ 0.54
TCEA3-206ENST00000492271 MYLPFQ96A32 169 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 MAGEF1Q9HAY2 307 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 KIAA1586Q9HCI6 787 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 GMEB2Q9UKD1 530 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 CDH9Q9ULB4 789 aa18.45■□□□□ 0.54
TCEA3-206ENST00000492271 AMPD3Q01432 767 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms