RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 A0A0B4J269 797 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 ADRB2P07550 413 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 HNRNPLP14866 589 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 TAF6P49848 677 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 FAM160A1Q05DH4 1040 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 ZNF268Q14587 947 aaPredicted RBP16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 DDR2Q16832 855 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 TRIM61Q5EBN2 209 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 ARSHQ5FYA8 562 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 SFTPA1Q8IWL2 248 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 THEM5Q8N1Q8 247 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 SYT2Q8N9I0 419 aaPredicted RBP16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 C2orf15Q8WU43 125 aaKnown RBP16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 ATP2A3Q93084 1043 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 FAM84AQ96KN4 292 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 REEP2Q9BRK0 252 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 ZMYM5Q9UJ78 669 aa16.52■□□□□ 0.24
SCAMP3-208ENST00000490999 CACNA1EQ15878 2313 aa16.52■□□□□ 0.23
SCAMP3-208ENST00000490999 ANK1P16157 1881 aa16.52■□□□□ 0.23
SCAMP3-208ENST00000490999 MYO16Q9Y6X6 1858 aa16.52■□□□□ 0.23
SCAMP3-208ENST00000490999 SCAMP3O14828 347 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 ACAT1P24752 427 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 PTGER3P43115 390 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 KYAT1Q16773 422 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 EFCAB13Q8IY85 973 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 FRMD1Q8N878 549 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 SH3RF2Q8TEC5 729 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 USP33Q8TEY7 942 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 CNOT6LQ96LI5 555 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 IKZF4Q9H2S9 585 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 ZDHHC4Q9NPG8 344 aa16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-208ENST00000490999 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 C2orf78A6NCI8 922 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 ANKRD63C9JTQ0 380 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 H0YCG3 227 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 HCRTO43612 131 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 PIGRP01833 764 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 CSH1P0DML2 217 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 CSH2P0DML3 217 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 CYP2F1P24903 491 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 SIM1P81133 766 aaPredicted RBP16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 TSPY1Q01534 308 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 LRSAM1Q6UWE0 723 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 C11orf74Q86VG3 221 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 GPBP1Q86WP2 473 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 TMEFF1Q8IYR6 380 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 DCP1BQ8IZD4 617 aaKnown RBP16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 ARL14EPQ8N8R7 260 aaPredicted RBP16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 LRRC15Q8TF66 581 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 EXOC4Q96A65 974 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 LINC00597Q9H2U6 94 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 TMEM74BQ9NUR3 256 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 DPP3Q9NY33 737 aa16.5■□□□□ 0.23
SCAMP3-208ENST00000490999 ABCA7Q8IZY2 2146 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 SETXQ7Z333 2677 aaKnown RBP16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 K7EQS6 105 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 NOL4O94818 638 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 USP17L7P0C7H9 530 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 ENGP17813 658 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 SCN1AP35498 2009 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 OPRD1P41143 372 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 PRPHP41219 470 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 MESP2Q0VG99 397 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 TMEM119Q4V9L6 283 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 HYIQ5T013 277 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 CD302Q8IX05 232 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 ALLCQ8N6M5 410 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 FAM184AQ8NB25 1140 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 FNBP1Q96RU3 617 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 TSPAN18Q96SJ8 248 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 DERAQ9Y315 318 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 C2CD2Q9Y426 696 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 NEUROG3Q9Y4Z2 214 aa16.49■□□□□ 0.23
SCAMP3-208ENST00000490999 IGSF10Q6WRI0 2623 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 KPNA7A9QM74 516 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 LAD1O00515 517 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 FAM13AO94988 1023 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 WNT7BP56706 349 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 SMARCB1Q12824 385 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 KCNB1Q14721 858 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 CRY1Q16526 586 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 GAB4Q2WGN9 574 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 SCARA3Q6AZY7 606 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 CCSER1Q9C0I3 900 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 TMEM206Q9H813 350 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 KCND2Q9NZV8 630 aa16.48■□□□□ 0.23
SCAMP3-208ENST00000490999 KCNG1Q9UIX4 513 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms