RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SATB2Q9UPW6 733 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 C3P01024 1663 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 PROSCO94903 275 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 PENKP01210 267 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 ATP5BP06576 529 aaKnown RBP11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 AKR1B1P15121 316 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 AMPD1P23109 780 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 SNAP25P60880 206 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 GTF2IP78347 998 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 RMND5BQ96G75 393 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 SRPK1Q96SB4 655 aaKnown RBP11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 TMEM121Q9BTD3 319 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 TUBA8Q9NY65 449 aaPredicted RBP11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 HEY1Q9Y5J3 304 aa11.78□□□□□ -0.52
CRNKL1-204ENST00000490910 MON2Q7Z3U7 1717 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 AKAP10O43572 662 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 CST8O60676 142 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 DGKIO75912 1065 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 INAQ16352 499 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 BNC2Q6ZN30 1099 aaPredicted RBP11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 SETD3Q86TU7 594 aaPredicted RBP11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 ALYREFQ86V81 257 aaKnown RBP11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 SLC26A11Q86WA9 606 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 CCDC33Q8N5R6 958 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 SEC14L1Q92503 715 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 NRDE2Q9H7Z3 1164 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 S100A14Q9HCY8 104 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 RSL24D1Q9UHA3 163 aaKnown RBP11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 IGSF9BQ9UPX0 1349 aa11.77□□□□□ -0.52
CRNKL1-204ENST00000490910 ANKRD33BA6NCL7 494 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 PRPSAP2O60256 369 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 RBP3P10745 1247 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 PPARGP37231 505 aaPredicted RBP11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 CBWD6Q4V339 395 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 ZNF394Q53GI3 561 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 CBWD3Q5JTY5 395 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 CBWD5Q5RIA9 395 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 LRRC8EQ6NSJ5 796 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 ADAM7Q9H2U9 754 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 CDY1Q9Y6F8 540 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 DIP2AQ14689 1571 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 ASLP04424 464 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 APRTP07741 180 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 EFTUD2Q15029 972 aaKnown RBP eCLIP11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 SIX6OS1Q8N1H7 587 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 TMEM79Q9BSE2 394 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 SNX25Q9H3E2 840 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 PCDH9Q9HC56 1237 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 SEPT10Q9P0V9 454 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 MYRFQ9Y2G1 1151 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 WDR37Q9Y2I8 494 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 SNX5Q9Y5X3 404 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 GMEB1Q9Y692 573 aa11.77□□□□□ -0.53
CRNKL1-204ENST00000490910 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 THRAP10827 490 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 NEK2P51955 445 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 NLRP11P59045 1033 aaKnown RBP11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 PSMC6P62333 389 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 MPP3Q13368 585 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 FEZF2Q8TBJ5 459 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 CELF1Q92879 486 aaKnown RBP11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 LXNQ9BS40 222 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 SORCS3Q9UPU3 1222 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 AURKCQ9UQB9 309 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 INPP5FQ9Y2H2 1132 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 CYP19A1P11511 503 aaPredicted RBP11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 SNX16P57768 344 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 PDPK2PQ6A1A2 396 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 PAF1Q8N7H5 531 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 TSPAN14Q8NG11 270 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 CHURC1Q8WUH1 139 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 ATP6V0A1Q93050 837 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 JMJD4Q9H9V9 463 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 MYH15Q9Y2K3 1946 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 SYDE2Q5VT97 1194 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 ZFP1Q6P2D0 407 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 ZBTB8BQ8NAP8 495 aaPredicted RBP11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 FAM213AQ9BRX8 229 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 UNC45AQ9H3U1 944 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 ATAD3AQ9NVI7 634 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 AP4B1Q9Y6B7 739 aa11.76□□□□□ -0.53
CRNKL1-204ENST00000490910 RIC1Q4ADV7 1423 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 MAP3K13O43283 966 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms