RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ATXN1P54253 815 aaKnown RBP4.83□□□□□ -1.64
HMGN1-218ENST00000490032 RAB1AP62820 205 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 SSBP2P81877 361 aaPredicted RBP4.83□□□□□ -1.64
HMGN1-218ENST00000490032 PROSER3Q2NL68 480 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 TREML2Q5T2D2 321 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 ARHGAP40Q5TG30 622 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 B3GNT9Q6UX72 402 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF782Q6ZMW2 699 aaPredicted RBP4.83□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF804AQ7Z570 1209 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 ATG4AQ8WYN0 398 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 CAMKK2Q96RR4 588 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 SEMA4CQ9C0C4 833 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 DDX56Q9NY93 547 aaKnown RBP4.83□□□□□ -1.64
HMGN1-218ENST00000490032 XPR1Q9UBH6 696 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 GABBR1Q9UBS5 961 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF70Q9UC06 446 aaPredicted RBP4.83□□□□□ -1.64
HMGN1-218ENST00000490032 NDRG4Q9ULP0 352 aaKnown RBP4.83□□□□□ -1.64
HMGN1-218ENST00000490032 hCG_2014768A0A024R1R8 64 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 AKAP10O43572 662 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 AP1G1O43747 822 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 TJP3O95049 919 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 PDGFRBP09619 1106 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 CYP2C9P11712 490 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 CLCN2P51788 898 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 ARFIP2P53365 341 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 WNT3P56703 355 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 EEFSECP57772 596 aaKnown RBP4.82□□□□□ -1.64
HMGN1-218ENST00000490032 GRM1Q13255 1194 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 FGL2Q14314 439 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 SLC44A4Q53GD3 710 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 RGS7BPQ6MZT1 257 aaPredicted RBP4.82□□□□□ -1.64
HMGN1-218ENST00000490032 SLC29A4Q7RTT9 530 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 DENND1CQ8IV53 801 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 SMG7Q92540 1137 aaKnown RBP4.82□□□□□ -1.64
HMGN1-218ENST00000490032 MESP1Q9BRJ9 268 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 RTFDC1Q9BY42 306 aaPredicted RBP4.82□□□□□ -1.64
HMGN1-218ENST00000490032 ARMT1Q9H993 441 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 NMRK2Q9NPI5 230 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 CNNM1Q9NRU3 951 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 DUSP22Q9NRW4 184 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 PIH1D1Q9NWS0 290 aaKnown RBP4.82□□□□□ -1.64
HMGN1-218ENST00000490032 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
HMGN1-218ENST00000490032 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF804BA4D1E1 1349 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 UBXN7O94888 489 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 CT47B1P0C2W7 299 aaPredicted RBP4.81□□□□□ -1.64
HMGN1-218ENST00000490032 HSPA6P17066 643 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 LRPAP1P30533 357 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 CYP2C18P33260 490 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 SLC11A2P49281 568 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 UCP3P55916 312 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 ANAPC15P60006 121 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 E2F2Q14209 437 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 EZH2Q15910 746 aaKnown RBP4.81□□□□□ -1.64
HMGN1-218ENST00000490032 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 VGLL2Q8N8G2 317 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 FANCBQ8NB91 859 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 RP9Q8TA86 221 aaKnown RBP4.81□□□□□ -1.64
HMGN1-218ENST00000490032 SLC35G2Q8TBE7 412 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 JPH3Q8WXH2 748 aaPredicted RBP4.81□□□□□ -1.64
HMGN1-218ENST00000490032 GLG1Q92896 1179 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF778Q96MU6 729 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 FSD1LQ9BXM9 530 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 TRIM54Q9BYV2 358 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 SLC29A3Q9BZD2 475 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 DPH1Q9BZG8 443 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 GLOD4Q9HC38 313 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 RNF7Q9UBF6 113 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 CPA4Q9UI42 421 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 TMX2Q9Y320 296 aa4.81□□□□□ -1.64
HMGN1-218ENST00000490032 A0A087WWL8 130 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 A1L4Q6 167 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 TISP43B9A030 160 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 MYO1FO00160 1098 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 QSOX1O00391 747 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 RFPL1O75677 317 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 ERBB2P04626 1255 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 FESP07332 822 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 CSF1RP07333 972 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
HMGN1-218ENST00000490032 NCLP19338 710 aaKnown RBP4.8□□□□□ -1.64
HMGN1-218ENST00000490032 HTR1BP28222 390 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF81P51508 661 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 MYO1EQ12965 1108 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 GTF2H3Q13889 308 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 TMEM119Q4V9L6 283 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF66Q6ZN08 573 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 PARS2Q7L3T8 475 aaKnown RBP4.8□□□□□ -1.64
HMGN1-218ENST00000490032 GAS2L3Q86XJ1 694 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 SCARB1Q8WTV0 552 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 KBTBD7Q8WVZ9 684 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 TAAR9Q96RI9 348 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 P2RX7Q99572 595 aaKnown RBP4.8□□□□□ -1.64
HMGN1-218ENST00000490032 CDH19Q9H159 772 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 SH3BP4Q9P0V3 963 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 ZNF180Q9UJW8 692 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 GABRQQ9UN88 632 aa4.8□□□□□ -1.64
HMGN1-218ENST00000490032 WDR91A4D1P6 747 aa4.79□□□□□ -1.64
HMGN1-218ENST00000490032 XRCC6P12956 609 aaKnown RBP eCLIP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms