RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TRIM67Q6ZTA4 783 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 SLC44A3Q8N4M1 653 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 B3GALNT2Q8NCR0 500 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 SEMA4DQ92854 862 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CEP295NLQ96MC4 621 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 DNAI2Q9GZS0 605 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.49■□□□□ 0.554e-6■■■■■ 35.9
MDC1-206ENST00000489540 MOSPD3O75425 235 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CCDC192P0DO97 292 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 BDNFP23560 247 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 MARSP56192 900 aaKnown RBP18.49■□□□□ 0.55
MDC1-206ENST00000489540 NLRP12P59046 1061 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 SIGLEC14Q08ET2 396 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CETN1Q12798 172 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 HTR4Q13639 388 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CCDC142Q17RM4 750 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CT47A1Q5JQC4 288 aaPredicted RBP18.49■□□□□ 0.55
MDC1-206ENST00000489540 SCN4BQ8IWT1 228 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 CRYBG2Q8N1P7 616 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 TTC39CQ8N584 583 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 RSAD2Q8WXG1 361 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 DPEP3Q9H4B8 488 aa18.49■□□□□ 0.55
MDC1-206ENST00000489540 C2orf16Q68DN1 1984 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 C5orf42Q9H799 3197 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 TSC2P49815 1807 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 P4HA2O15460 535 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 ERCC5P28715 1186 aaPredicted RBP18.48■□□□□ 0.55
MDC1-206ENST00000489540 CDC25CP30307 473 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 GRIK1P39086 918 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 FMO5P49326 533 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 GPR15P49685 360 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 NDST1P52848 882 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 ARHGAP15Q53QZ3 475 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 PARM1Q6UWI2 310 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 TRIM59Q8IWR1 403 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 SHKBP1Q8TBC3 707 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 GPR152Q8TDT2 470 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 SPATA17Q96L03 361 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 GCNAQ96QF7 691 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 ELOVL4Q9GZR5 314 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 ATXN3LQ9H3M9 355 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 FAM124BQ9H5Z6 455 aaPredicted RBP18.48■□□□□ 0.55
MDC1-206ENST00000489540 ZNF334Q9HCZ1 680 aaPredicted RBP18.48■□□□□ 0.55
MDC1-206ENST00000489540 NUMBLQ9Y6R0 609 aa18.48■□□□□ 0.55
MDC1-206ENST00000489540 ATP8B3O60423 1300 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 A0A1W2PRU2 124 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 TRIM66O15016 1216 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 LRRN2O75325 713 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 HMGA1P17096 107 aaKnown RBP18.47■□□□□ 0.55
MDC1-206ENST00000489540 GJA1P17302 382 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 GABRR2P28476 465 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 INCA1Q0VD86 236 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 TEAD2Q15562 447 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 GAREM2Q75VX8 874 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 ACOT1Q86TX2 421 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 FGF14Q92915 247 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 NT5C1AQ9BXI3 368 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 B3GNT5Q9BYG0 378 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
MDC1-206ENST00000489540 DUSP12Q9UNI6 340 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.47■□□□□ 0.55
MDC1-206ENST00000489540 DENND4AQ7Z401 1863 aa18.47■□□□□ 0.55
MDC1-206ENST00000489540 SLC38A8A6NNN8 435 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 PRR33A8MZF0 331 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 ECI2O75521 394 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 NOL4O94818 638 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 ANXA13P27216 316 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 TPD52L1Q16890 204 aaPredicted RBP18.46■□□□□ 0.55
MDC1-206ENST00000489540 DPCR1Q3MIW9 517 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 SDHAF4Q5VUM1 108 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 RBM43Q6ZSC3 357 aaKnown RBP18.46■□□□□ 0.55
MDC1-206ENST00000489540 SMARCD2Q92925 531 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 C8orf48Q96LL4 319 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 MYRFLQ96LU7 910 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 MED15Q96RN5 788 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 SLITRK6Q9H5Y7 841 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 IL21Q9HBE4 155 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 C11orf16Q9NQ32 467 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 EHD2Q9NZN4 543 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 ZMYM5Q9UJ78 669 aa18.46■□□□□ 0.55
MDC1-206ENST00000489540 TMEM221A6NGB7 291 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 M0R296 226 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 NRG2O14511 850 aaPredicted RBP18.45■□□□□ 0.54
MDC1-206ENST00000489540 CILPO75339 1184 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 KCNH2Q12809 1159 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 FAM78AQ5JUQ0 283 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 POTEHQ6S545 545 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 TATDN2Q93075 761 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 ELSPBP1Q96BH3 223 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 TRMT2BQ96GJ1 504 aaKnown RBP18.45■□□□□ 0.54
MDC1-206ENST00000489540 ZSWIM3Q96MP5 696 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 ASB16Q96NS5 453 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 MED10Q9BTT4 135 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 RPP25Q9BUL9 199 aaKnown RBP18.45■□□□□ 0.54
MDC1-206ENST00000489540 TRPV4Q9HBA0 871 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 ZFP14Q9HCL3 533 aa18.45■□□□□ 0.54
MDC1-206ENST00000489540 MAGED2Q9UNF1 606 aaPredicted RBP18.45■□□□□ 0.54
MDC1-206ENST00000489540 FAM86C2PA6NEL3 165 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 SOBPA7XYQ1 873 aa18.44■□□□□ 0.54
MDC1-206ENST00000489540 CLDN5O00501 218 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms