RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CEP63Q96MT8 703 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 IPO9Q96P70 1041 aaKnown RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 PKMYT1Q99640 499 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 KXD1Q9BQD3 176 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 LRRC3Q9BY71 257 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 SMYD3Q9H7B4 428 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 METTL14Q9HCE5 456 aaKnown RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 KIAA1468Q9P260 1216 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 ARMCX3Q9UH62 379 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 ZMYM5Q9UJ78 669 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 MAGED2Q9UNF1 606 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 TRIM49BA6NDI0 452 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 GOLGA6L22H0YM25 854 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 DPYSL4O14531 572 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 TRIM66O15016 1216 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 FGFR1OPO95684 399 aaKnown RBP15.23■□□□□ 0.03
BRCA1-218ENST00000489037 ASS1P00966 412 aaKnown RBP15.23■□□□□ 0.03
BRCA1-218ENST00000489037 GRIK1P39086 918 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 MXI1P50539 228 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 PFKPQ01813 784 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 PPP3CAQ08209 521 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 CCDC40Q4G0X9 1142 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 WDR44Q5JSH3 913 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 FAM78AQ5JUQ0 283 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 GPR158Q5T848 1215 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 B3GALNT2Q8NCR0 500 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 ZSCAN18Q8TBC5 510 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-218ENST00000489037 GPR152Q8TDT2 470 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 NELFBQ8WX92 580 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 CEP295NLQ96MC4 621 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 ASB16Q96NS5 453 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 ZNF334Q9HCZ1 680 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-218ENST00000489037 CRTAC1Q9NQ79 661 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 SLC2A4RGQ9NR83 387 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 EHD2Q9NZN4 543 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 CTNND2Q9UQB3 1225 aa15.23■□□□□ 0.03
BRCA1-218ENST00000489037 GREB1Q4ZG55 1949 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 MOSPD3O75425 235 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 BDNFP23560 247 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 GPR15P49685 360 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 PMS1P54277 932 aaKnown RBP15.22■□□□□ 0.03
BRCA1-218ENST00000489037 CDH8P55286 799 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 NOP14P78316 857 aaKnown RBP15.22■□□□□ 0.03
BRCA1-218ENST00000489037 PAK1Q13153 545 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 TANGO2Q6ICL3 276 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 FOXR2Q6PJQ5 311 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 CLEC17AQ6ZS10 378 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 GAREM2Q75VX8 874 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 FRMD5Q7Z6J6 570 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 UNC93AQ86WB7 457 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 ZC3H3Q8IXZ2 948 aaKnown RBP15.22■□□□□ 0.03
BRCA1-218ENST00000489037 YAF2Q8IY57 180 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 SIX5Q8N196 739 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 FBXL13Q8NEE6 735 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 FLCNQ8NFG4 579 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 TAS1R2Q8TE23 839 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 MRPS31Q92665 395 aaKnown RBP15.22■□□□□ 0.03
BRCA1-218ENST00000489037 PCED1BQ96HM7 432 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 SHDQ96IW2 340 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 RPP25Q9BUL9 199 aaKnown RBP15.22■□□□□ 0.03
BRCA1-218ENST00000489037 ELOVL4Q9GZR5 314 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 TASP1Q9H6P5 420 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 CYP3A43Q9HB55 503 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 CA14Q9ULX7 337 aa15.22■□□□□ 0.03
BRCA1-218ENST00000489037 NUP210Q8TEM1 1887 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-218ENST00000489037 PPP1R3GB7ZBB8 358 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 GNA14O95837 355 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
BRCA1-218ENST00000489037 DDX6P26196 483 aaKnown RBP eCLIP15.21■□□□□ 0.03
BRCA1-218ENST00000489037 MCCD1P59942 119 aaPredicted RBP15.21■□□□□ 0.03
BRCA1-218ENST00000489037 GPC5P78333 572 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 SDHAF4Q5VUM1 108 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 TTC39CQ8N584 583 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 DEPDC1BQ8WUY9 529 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 SPATA17Q96L03 361 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 ZSWIM3Q96MP5 696 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 TRMT61BQ9BVS5 477 aaKnown RBP15.21■□□□□ 0.03
BRCA1-218ENST00000489037 NIF3L1Q9GZT8 377 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 DPEP3Q9H4B8 488 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 TRPV4Q9HBA0 871 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.21■□□□□ 0.03
BRCA1-218ENST00000489037 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
BRCA1-218ENST00000489037 ZNF318Q5VUA4 2279 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 NOL4O94818 638 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 HMGA1P17096 107 aaKnown RBP15.2■□□□□ 0.02
BRCA1-218ENST00000489037 PSMC3P17980 439 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 BMP6P22004 513 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 NDST1P52848 882 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 STX17P56962 302 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 NLRP12P59046 1061 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 CYP4F8P98187 520 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 CETN1Q12798 172 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 CCDC142Q17RM4 750 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 ELMO3Q96BJ8 720 aa15.2■□□□□ 0.02
BRCA1-218ENST00000489037 TRMT2BQ96GJ1 504 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms