RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 PAFAH2Q99487 392 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 GORASP1Q9BQQ3 440 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 TMEM121Q9BTD3 319 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 ADAM33Q9BZ11 813 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 DDX56Q9NY93 547 aaKnown RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 SNCAIPQ9Y6H5 919 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 SIGLEC16A6NMB1 481 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 TBXAS1P24557 533 aaPredicted RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 ARL4CP56559 192 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 SOX10P56693 466 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 MXRA7P84157 204 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 ZNF252P-AS1Q0IIN9 211 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 CCDC6Q16204 474 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 LRRC23Q53EV4 343 aaPredicted RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 DNAJC14Q6Y2X3 702 aaPredicted RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 TSHZ1Q6ZSZ6 1077 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 MYLK4Q86YV6 388 aaPredicted RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 PPIL6Q8IXY8 311 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 FAM151AQ8WW52 585 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 DTNBP1Q96EV8 351 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 CEP170P1Q96L14 293 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 SYT15Q9BQS2 421 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 APOBEC3GQ9HC16 384 aaKnown RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 HEY2Q9UBP5 337 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 LRCH1Q9Y2L9 728 aa20.47■□□□□ 0.87
HMG20B-213ENST00000488973 MTO1Q9Y2Z2 717 aaKnown RBP20.47■□□□□ 0.87
HMG20B-213ENST00000488973 WDR91A4D1P6 747 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 H0YCG3 227 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 TGDSO95455 350 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 IFNB1P01574 187 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 EIF2AK2P19525 551 aaKnown RBP20.46■□□□□ 0.87
HMG20B-213ENST00000488973 SSTR1P30872 391 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 SSTR3P32745 418 aaPredicted RBP20.46■□□□□ 0.87
HMG20B-213ENST00000488973 CDKN2BP42772 138 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 OCRLQ01968 901 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 DSTYKQ6XUX3 929 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 TAS1R3Q7RTX0 852 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 MCPH1Q8NEM0 835 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 ARL8BQ9NVJ2 186 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 ARHGAP28Q9P2N2 729 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 CFAP69A5D8W1 941 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 BANF1O75531 89 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 CALB1P05937 261 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 ARFIP2P53365 341 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 EFTUD2Q15029 972 aaKnown RBP eCLIP20.46■□□□□ 0.871e-5■□□□□ 9
HMG20B-213ENST00000488973 TMEM154Q6P9G4 183 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 SKA1Q96BD8 255 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 CCDC97Q96F63 343 aaPredicted RBP20.46■□□□□ 0.87
HMG20B-213ENST00000488973 TAAR1Q96RJ0 339 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 TSSK1BQ9BXA7 367 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 VCXQ9H320 206 aa20.46■□□□□ 0.87
HMG20B-213ENST00000488973 MMADHCQ9H3L0 296 aaPredicted RBP20.46■□□□□ 0.87
HMG20B-213ENST00000488973 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.46■□□□□ 0.87
HMG20B-213ENST00000488973 A0A0G2JND7 137 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 E7ESA3 106 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 GOLGA8SH3BPF8 625 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 GOLGA8MH3BSY2 632 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 GYG2O15488 501 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 GNAT1P11488 350 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 TPP2P29144 1249 aaPredicted RBP20.45■□□□□ 0.86
HMG20B-213ENST00000488973 OVGP1Q12889 678 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 KRT72Q14CN4 511 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 SNX30Q5VWJ9 437 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 C3orf62Q6ZUJ4 267 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 SLC16A10Q8TF71 515 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 DCAKDQ8WVC6 231 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 HAUS1Q96CS2 278 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 PDLIM7Q9NR12 457 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 ASB3Q9Y575 518 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 PCDHA10Q9Y5I2 948 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 TCRBV5S1A1TA0A578 114 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 F8VP50 259 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 TSHRP16473 764 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 LIG4P49917 911 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 TUBP50607 506 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 WNT7BP56706 349 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 CDK16Q00536 496 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
HMG20B-213ENST00000488973 RCN1Q15293 331 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 CHSY1Q86X52 802 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 NAT8LQ8N9F0 302 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 ZNF606Q8WXB4 792 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 FRMD8P1Q9BZ68 369 aaPredicted RBP20.45■□□□□ 0.86
HMG20B-213ENST00000488973 SLC17A7Q9P2U7 560 aa20.45■□□□□ 0.86
HMG20B-213ENST00000488973 PTPRJQ12913 1337 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 DGAT1O75907 488 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 MYCLP12524 364 aaPredicted RBP20.44■□□□□ 0.86
HMG20B-213ENST00000488973 SKIP12755 728 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 SLC34A1Q06495 639 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 ZRSR2Q15696 482 aaKnown RBP20.44■□□□□ 0.86
HMG20B-213ENST00000488973 ACSBG2Q5FVE4 666 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 FNBP1LQ5T0N5 605 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 CPT1BQ92523 772 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 SLX1AQ9BQ83 275 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 GLIS2Q9BZE0 524 aaPredicted RBP20.44■□□□□ 0.86
HMG20B-213ENST00000488973 SYNCQ9H7C4 482 aa20.44■□□□□ 0.86
HMG20B-213ENST00000488973 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
HMG20B-213ENST00000488973 G3BP2Q9UN86 482 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms