RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ANK1P16157 1881 aa10.02□□□□□ -0.8
COL17A1-207ENST00000488320 URB1O60287 2271 aaKnown RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 TRAV19A0A0A6YYK7 116 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ANTXRLA6NF34 631 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 MYMKA6NI61 221 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 PRPF40AO75400 957 aaKnown RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 TOM1L1O75674 476 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 KLF8O95600 359 aaPredicted RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 NFATC1O95644 943 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 CKMP06732 381 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 CLTAP09496 248 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 CSH1P0DML2 217 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 CSH2P0DML3 217 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 HAPLN1P10915 354 aaPredicted RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 HMGA1P17096 107 aaKnown RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 MCM7P33993 719 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 CCT6AP40227 531 aaKnown RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 AARSP49588 968 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 LILRA4P59901 499 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 SCRN1Q12765 414 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 SLC14A1Q13336 389 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 NBR1Q14596 966 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 EOGTQ5NDL2 527 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 SLC36A4Q6YBV0 504 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 TAS1R3Q7RTX0 852 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ZNF605Q86T29 641 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 TMEM150AQ86TG1 271 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 DCP1BQ8IZD4 617 aaKnown RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 RGL4Q8IZJ4 473 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ALLCQ8N6M5 410 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 SLC39A7Q92504 469 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ZCWPW1Q9H0M4 648 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 LINC00597Q9H2U6 94 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ZSWIM6Q9HCJ5 1215 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 CACNA2D2Q9NY47 1150 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ORC3Q9UBD5 711 aaPredicted RBP10.02□□□□□ -0.81
COL17A1-207ENST00000488320 DSEQ9UL01 958 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 KIAA1024Q9UPX6 916 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
COL17A1-207ENST00000488320 TCRBV21S2A2A0A5A6 115 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 LACTBL1A8MY62 500 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 BTBD18B2RXH4 712 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 SGK1O00141 431 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 WNT7AO00755 349 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 CYB561D2O14569 222 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 ABLIM1O14639 778 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 PPEF2O14830 753 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 SLC16A4O15374 487 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 HIP1RO75146 1068 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 HNRNPLP14866 589 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL17A1-207ENST00000488320 MUTP22033 750 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 ZNF33AQ06730 810 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 CYP4F3Q08477 520 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 ZNF77Q15935 545 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 MAP7D1Q3KQU3 841 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 PEAR1Q5VY43 1037 aaPredicted RBP10.01□□□□□ -0.81
COL17A1-207ENST00000488320 HAUS3Q68CZ6 603 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 TOGARAM2Q6ZUX3 1019 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 NAXDQ8IW45 347 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 PIP4P2Q8N4L2 257 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 SH3RF2Q8TEC5 729 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 SETD7Q8WTS6 366 aaKnown RBP10.01□□□□□ -0.81
COL17A1-207ENST00000488320 TNFRSF25Q93038 417 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 PI4K2AQ9BTU6 479 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 PDRG1Q9NUG6 133 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 DNAAF2Q9NVR5 837 aaKnown RBP10.01□□□□□ -0.81
COL17A1-207ENST00000488320 ARHGAP28Q9P2N2 729 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 UXTQ9UBK9 157 aaPredicted RBP10.01□□□□□ -0.81
COL17A1-207ENST00000488320 PCDHB5Q9Y5E4 795 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 ASH1LQ9NR48 2969 aaKnown RBP10.01□□□□□ -0.81
COL17A1-207ENST00000488320 BPTFQ12830 3046 aa10.01□□□□□ -0.81
COL17A1-207ENST00000488320 CELSR3Q9NYQ7 3312 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 OBSL1O75147 1896 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 ACACAQ13085 2346 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 TCHHQ07283 1943 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 TTC26A0AVF1 554 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 SFI1A8K8P3 1242 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
COL17A1-207ENST00000488320 APODP05090 189 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 ATXN8OSP0DMR3 200 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 PAX3P23760 479 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 OPRD1P41143 372 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 SLC6A11P48066 632 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 GPR15P49685 360 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 FOSBP53539 338 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 SMTNP53814 917 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 MCL1Q07820 350 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 TRIM29Q14134 588 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 ZBTB6Q15916 424 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 ECM1Q16610 540 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 PLEKHG6Q3KR16 790 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 HSF5Q4G112 596 aaPredicted RBP10□□□□□ -0.81
COL17A1-207ENST00000488320 EMC10Q5UCC4 262 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 SDHAF4Q5VUM1 108 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 SLCO6A1Q86UG4 719 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 LRRTM3Q86VH5 581 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms