RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 KINO60870 393 aaKnown RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ATP2C2O75185 946 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 LRG1P02750 347 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 POU2F2P09086 479 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 LAMP2P13473 410 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 GJA1P17302 382 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ATF6P18850 670 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 PAX3P23760 479 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 GPR15P49685 360 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 PSMC1P62191 440 aaKnown RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 CLDN10P78369 228 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 SURF1Q15526 300 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 TMEM31Q5JXX7 168 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 PRSS36Q5K4E3 855 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ZNF658Q5TYW1 1059 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 HFE2Q6ZVN8 426 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 METTL23Q86XA0 190 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 NPAS3Q8IXF0 933 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 GPR152Q8TDT2 470 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 EPS8L1Q8TE68 723 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 TMEM174Q8WUU8 243 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 EDAQ92838 391 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 FGF13Q92913 245 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 SMARCE1Q969G3 411 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ACSF2Q96CM8 615 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ASIC4Q96FT7 647 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 GSDMAQ96QA5 445 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 SEPT5Q99719 369 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 LPIN3Q9BQK8 851 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 MRPL45Q9BRJ2 306 aaKnown RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ARHGAP9Q9BRR9 750 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 RPP25Q9BUL9 199 aaKnown RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 KCNK12Q9HB15 430 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 DDX43Q9NXZ2 648 aaKnown RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ABI2Q9NYB9 513 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 EPS15L1Q9UBC2 864 aa7.68□□□□□ -1.18
UBE4B-209ENST00000487244 NUP210Q8TEM1 1887 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-209ENST00000487244 ANHXE9PGG2 379 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 GABRDO14764 452 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 GPR37L1O60883 481 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 HUS1O60921 280 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PHACTR2O75167 634 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 LRRN2O75325 713 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PRPF40AO75400 957 aaKnown RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 MOSPD3O75425 235 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SMC2O95347 1197 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PDGFBP01127 241 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 C4BPAP04003 597 aaKnown RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 MYL4P12829 197 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 LMO2P25791 158 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 RAP1GAPP47736 663 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 VAMP7P51809 220 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 UBE2HP62256 183 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PTK2Q05397 1052 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PPP3CAQ08209 521 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 MYO1EQ12965 1108 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 BIRC3Q13489 604 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 MTMR3Q13615 1198 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 HTR4Q13639 388 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 NCOA4Q13772 614 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 CAMK4Q16566 473 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 NFIL3Q16649 462 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 EDRF1Q3B7T1 1238 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 WDR72Q3MJ13 1102 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 ZACNQ401N2 412 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 INTS6LQ5JSJ4 861 aaKnown RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 STXBP5Q5T5C0 1151 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SDHAF4Q5VUM1 108 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 ANKRD40Q6AI12 368 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PARM1Q6UWI2 310 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SCARA5Q6ZMJ2 495 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 TMC8Q8IU68 726 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 FAM186BQ8IYM0 893 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 ADSSL1Q8N142 457 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 THEM5Q8N1Q8 247 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 TOP6BLQ8N6T0 577 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SHKBP1Q8TBC3 707 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 FGF14Q92915 247 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 CCDC34Q96HJ3 373 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 CDK15Q96Q40 435 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 MMS19Q96T76 1030 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 KXD1Q9BQD3 176 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 PI4K2AQ9BTU6 479 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 C1QTNF1Q9BXJ1 281 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 LRRC3Q9BY71 257 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 OXCT2Q9BYC2 517 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SDCBP2Q9H190 292 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 DPEP3Q9H4B8 488 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SMYD3Q9H7B4 428 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 ZNF334Q9HCZ1 680 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 CRTAC1Q9NQ79 661 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 RMND1Q9NWS8 449 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
UBE4B-209ENST00000487244 GTF3C4Q9UKN8 822 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 CDH7Q9ULB5 785 aa7.67□□□□□ -1.18
UBE4B-209ENST00000487244 SORCS3Q9UPU3 1222 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms