RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 CD101Q93033 1021 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 APOL6Q9BWW8 343 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 CYLDQ9NQC7 956 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 KANSL3Q9P2N6 904 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 BCAP29Q9UHQ4 241 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 PCDHA1Q9Y5I3 950 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 MAD1L1Q9Y6D9 718 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 TNS1Q9HBL0 1735 aaKnown RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 CBFA2T3O75081 653 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 MTA2O94776 668 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 CYP19A1P11511 503 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 CDK4P11802 303 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ETS1P14921 441 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ALDH1A3P47895 512 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 STAT2P52630 851 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 HDAC4P56524 1084 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 NAA20P61599 178 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 UBAP2LQ14157 1087 aaKnown RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ADRM1Q16186 407 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 BMT2Q1RMZ1 405 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ACAD10Q6JQN1 1059 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 C16orf87Q6PH81 154 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 DPP8Q6V1X1 898 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 TRMT1LQ7Z2T5 733 aaKnown RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 PASD1Q8IV76 773 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ADGRF4Q8IZF3 695 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 PPP4R1Q8TF05 950 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 BTBD9Q96Q07 612 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 C11orf70Q9BRQ4 267 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 SLC13A1Q9BZW2 595 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 UNC45AQ9H3U1 944 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 RIOX1Q9H6W3 641 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 PLGRKTQ9HBL7 147 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 SSU72Q9NP77 194 aaKnown RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 TUBGCP4Q9UGJ1 667 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ITGB1BP2Q9UKP3 347 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 C6orf229H3BNL8 230 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 C6orf222P0C671 652 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 KRT10P13645 584 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 HOXD13P35453 343 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 NR1H2P55055 460 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ZNF568Q3ZCX4 644 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 NANOGNBQ7Z5D8 188 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 PCGF5Q86SE9 256 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 TREML1Q86YW5 311 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 PPM1NQ8N819 430 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 FBXO36Q8NEA4 188 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 FBXO27Q8NI29 283 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 UPF1Q92900 1129 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 CFAP36Q96G28 342 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 ZMAT2Q96NC0 199 aaKnown RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 FHDC1Q9C0D6 1143 aaPredicted RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 USP29Q9HBJ7 922 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 MINPP1Q9UNW1 487 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 DOLKQ9UPQ8 538 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 SHOC2Q9UQ13 582 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 HBS1LQ9Y450 684 aaKnown RBP6.52□□□□□ -1.37
VPS13D-209ENST00000487188 SCINQ9Y6U3 715 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 KCPQ6ZWJ8 1503 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 SPATA31A5Q5VU36 1347 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 SPATA31A7Q8IWB4 1347 aa6.52□□□□□ -1.37
VPS13D-209ENST00000487188 GOLGA8IPA6NC78 632 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 GOLGA8JA6NMD2 632 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 USP17L10C9JJH3 530 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 ADCY6O43306 1168 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 KRT37O76014 449 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 FGFR1P11362 822 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 CYP11B1P15538 503 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 FUT4P22083 530 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 KLRK1P26718 216 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 BTDP43251 543 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 EPC2Q52LR7 807 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 C2CD6Q53TS8 623 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 EFHC2Q5JST6 749 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 TTBK2Q6IQ55 1244 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 KLHL35Q6PF15 583 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 SMYD1Q8NB12 490 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 FNDC8Q8TC99 324 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 DIS3LQ8TF46 1054 aaKnown RBP6.51□□□□□ -1.37
VPS13D-209ENST00000487188 NLRP7Q8WX94 980 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 USP6NLQ92738 828 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 DCUN1D1Q96GG9 259 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
VPS13D-209ENST00000487188 KCNK16Q96T55 309 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 EIF2AK1Q9BQI3 630 aaKnown RBP6.51□□□□□ -1.37
VPS13D-209ENST00000487188 SYT11Q9BT88 431 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 GPR88Q9GZN0 384 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 EPB41L1Q9H4G0 881 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 OLFML3Q9NRN5 406 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 TBCCD1Q9NVR7 557 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 RSL24D1Q9UHA3 163 aaKnown RBP6.51□□□□□ -1.37
VPS13D-209ENST00000487188 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 HERC5Q9UII4 1024 aaKnown RBP6.51□□□□□ -1.37
VPS13D-209ENST00000487188 DNPEPQ9ULA0 475 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 AP4B1Q9Y6B7 739 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 ZBTB5O15062 677 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 KLHL2O95198 593 aa6.51□□□□□ -1.37
VPS13D-209ENST00000487188 PROCP04070 461 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms