RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 KCTD20Q7Z5Y7 419 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 CYP2W1Q8TAV3 490 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 CPT1CQ8TCG5 803 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 DEF6Q9H4E7 631 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 HEYLQ9NQ87 328 aaPredicted RBP5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 TM7SF3Q9NS93 570 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 RGL1Q9NZL6 768 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 RNF181Q9P0P0 153 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 LUZP4Q9P127 313 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 ST6GALNAC2Q9UJ37 374 aa5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
PRPF38A-203ENST00000487160 ZNF608Q9ULD9 1512 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 A0A0G2JLL6 359 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 CCDC189A1A4V9 331 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 E7ENX8 843 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TRIM24O15164 1050 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 RECQL4O94761 1208 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 CSTBP04080 98 aaKnown RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 ITGALP20701 1170 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 HOXA5P20719 270 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 PTDSS1P48651 473 aaKnown RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 PXNP49023 591 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 PPM1FP49593 454 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 LOXL3P58215 753 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TAP2Q03519 686 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 RAPGEF1Q13905 1077 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 RAB30Q15771 203 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TMEM95Q3KNT9 176 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 ZACNQ401N2 412 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 B3GNTL1Q67FW5 361 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 ZNF585AQ6P3V2 769 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TLDC1Q6P9B6 456 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TMEM108Q6UXF1 575 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TMPRSS9Q7Z410 1059 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 CLNKQ7Z7G1 428 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 TMEM132CQ8N3T6 1108 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 ATG16L2Q8NAA4 619 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 IPO4Q8TEX9 1081 aaKnown RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 PPM1EQ8WY54 764 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 SNX27Q96L92 541 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 BDH2Q9BUT1 245 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 DHX36Q9H2U1 1008 aaKnown RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 ZNF768Q9H5H4 540 aaKnown RBP5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 DKK4Q9UBT3 224 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 CAPN11Q9UMQ6 739 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 NEU2Q9Y3R4 380 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 PCDHGB3Q9Y5G1 929 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 CFTRP13569 1480 aa5.89□□□□□ -1.47
PRPF38A-203ENST00000487160 LGALS16A8MUM7 142 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 NPC1O15118 1278 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 CCP110O43303 1012 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 KCNQ3O43525 872 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 CFIP05156 583 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 LRPAP1P30533 357 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 GRK6P43250 576 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 ANXA11P50995 505 aaKnown RBP5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 DGKEP52429 567 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 COPAP53621 1224 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 FAM189BP81408 668 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 SATB1Q01826 763 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 FPGSQ05932 587 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 DYRK1AQ13627 763 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 KCNAB1Q14722 419 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 RABL3Q5HYI8 236 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 CACHD1Q5VU97 1274 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 CRTC1Q6UUV9 634 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 KIAA0408Q6ZU52 694 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 SPATA5Q8NB90 893 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 BPIFB1Q8TDL5 484 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 PPP2R3CQ969Q6 453 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 EVI5LQ96CN4 794 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 SCLT1Q96NL6 688 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 SLC46A2Q9BY10 475 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 AGO4Q9HCK5 861 aaKnown RBP5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 IGSF9Q9P2J2 1179 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 DNMT3BQ9UBC3 853 aaKnown RBP5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 MAP3K2Q9Y2U5 619 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 TCAF1Q9Y4C2 921 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 CDY1Q9Y6F8 540 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
PRPF38A-203ENST00000487160 PRAMEF33A0A0G2JMD5 474 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 AQP12BA6NM10 295 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 PRAMEF10O60809 474 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 FAM20BO75063 409 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 SOAT2O75908 522 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 NCR1O76036 304 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 RASAL1O95294 804 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 ATICP31939 592 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 CXADRP78310 365 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 MYO1EQ12965 1108 aa5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 TOB2Q14106 344 aaPredicted RBP5.87□□□□□ -1.47
PRPF38A-203ENST00000487160 SPARCL1Q14515 664 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms