RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 SLC35B2Q8TB61 432 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 KLHL29Q96CT2 875 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 KLRG1Q96E93 195 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 PLCD4Q9BRC7 762 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 ZWILCHQ9H900 591 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 DDX56Q9NY93 547 aaKnown RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 ABLIM1O14639 778 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 UPP2O95045 317 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 KRT16P08779 473 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 KRT15P19012 456 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 EIF4BP23588 611 aaKnown RBP18.43■□□□□ 0.54
TNXB-205ENST00000486148 CDH5P33151 784 aaPredicted RBP18.43■□□□□ 0.54
TNXB-205ENST00000486148 ASPAP45381 313 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 GDF10P55107 478 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 NR1H3Q13133 447 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 GRM1Q13255 1194 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 TRPC3Q13507 836 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 RBBP5Q15291 538 aaKnown RBP18.43■□□□□ 0.54
TNXB-205ENST00000486148 KCNT1Q5JUK3 1230 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 JOSD2Q8TAC2 188 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 ZNF518BQ9C0D4 1074 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 PCDH9Q9HC56 1237 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 CYTH4Q9UIA0 394 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 CPSF3Q9UKF6 684 aaKnown RBP18.43■□□□□ 0.54
TNXB-205ENST00000486148 PCDHGC3Q9UN70 934 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 OGTO15294 1046 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 PRPF4O43172 522 aaKnown RBP eCLIP18.43■□□□□ 0.54
TNXB-205ENST00000486148 HOXC6P09630 235 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 IL1R2P27930 398 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 RPA3P35244 121 aaPredicted RBP18.43■□□□□ 0.54
TNXB-205ENST00000486148 TCF7P36402 384 aaPredicted RBP18.43■□□□□ 0.54
TNXB-205ENST00000486148 PTPN20Q4JDL3 420 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 XYLT2Q9H1B5 865 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 UBN1Q9NPG3 1134 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 POLIQ9UNA4 740 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 SHOC2Q9UQ13 582 aa18.43■□□□□ 0.54
TNXB-205ENST00000486148 A0A1W2PPM1 405 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 PSMA2P25787 234 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 MARK3P27448 753 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 GPX6P59796 221 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 OSTNP61366 133 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 SLC25A11Q02978 314 aaKnown RBP18.42■□□□□ 0.54
TNXB-205ENST00000486148 TAP1Q03518 808 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ACVR2BQ13705 512 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 BLMHQ13867 455 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 PRKG1Q13976 671 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ANKRD22Q5VYY1 191 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 CENPUQ71F23 418 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ASRGL1Q7L266 308 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 EEPD1Q7L9B9 569 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 KIAA0319LQ8IZA0 1049 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 TMEM130Q8N3G9 435 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 LRRC71Q8N4P6 559 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ACTL9Q8TC94 416 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ZNF668Q96K58 619 aaPredicted RBP18.42■□□□□ 0.54
TNXB-205ENST00000486148 SLCO1B3Q9NPD5 702 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ARHGEF3Q9NR81 526 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 A8MUI8 341 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 PRKCBP05771 671 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 EFNA5P52803 228 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 OTUD4Q01804 1114 aaKnown RBP18.42■□□□□ 0.54
TNXB-205ENST00000486148 LAMTOR4Q0VGL1 99 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 ZNF699Q32M78 642 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 RNF149Q8NC42 400 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 GRAMD1AQ96CP6 724 aa18.42■□□□□ 0.54
TNXB-205ENST00000486148 FARP1Q9Y4F1 1045 aaPredicted RBP18.42■□□□□ 0.54
TNXB-205ENST00000486148 CLUHO75153 1309 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 SOWAHBA6NEL2 793 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 A6NHS1 94 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 EIF4E1BA6NMX2 242 aaKnown RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 MAGEB2O15479 319 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 LRCH4O75427 683 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 PIAS1O75925 651 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 HIRAP54198 1017 aaPredicted RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 EFTUD2Q15029 972 aaKnown RBP eCLIP18.41■□□□□ 0.54
TNXB-205ENST00000486148 SLC1A5Q15758 541 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 MSS51Q4VC12 460 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 CDR2LQ86X02 465 aaPredicted RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 TRIM50Q86XT4 487 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 THNSL1Q8IYQ7 743 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 TAB3Q8N5C8 712 aaPredicted RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 SMC6Q96SB8 1091 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 FAM167BQ9BTA0 163 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 NXF1Q9UBU9 619 aaKnown RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 PHTF1Q9UMS5 762 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 AGTPBP1Q9UPW5 1226 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 CTCFP49711 727 aaPredicted RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 RPS6KA3P51812 740 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 ORC1Q13415 861 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 SPARCL1Q14515 664 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 FNBP1LQ5T0N5 605 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 TREML2Q5T2D2 321 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 MAK16Q9BXY0 300 aaKnown RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 BTBD7Q9P203 1132 aa18.41■□□□□ 0.54
TNXB-205ENST00000486148 CPSF2Q9P2I0 782 aaKnown RBP18.41■□□□□ 0.54
TNXB-205ENST00000486148 CST8O60676 142 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms