RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 TWF1Q12792 350 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 SMAD4Q13485 552 aaKnown RBP25.15■■□□□ 1.62
ABCF3-216ENST00000485921 CFAP221Q4G0U5 840 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 C12orf29Q8N999 325 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 SLC4A11Q8NBS3 891 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 SMG7Q92540 1137 aaKnown RBP25.15■■□□□ 1.62
ABCF3-216ENST00000485921 JAKMIP2Q96AA8 810 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 HEXIM2Q96MH2 286 aaKnown RBP25.15■■□□□ 1.62
ABCF3-216ENST00000485921 RHOBTB2Q9BYZ6 727 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 PIDD1Q9HB75 910 aa25.15■■□□□ 1.62
ABCF3-216ENST00000485921 RTN4Q9NQC3 1192 aaKnown RBP25.15■■□□□ 1.62
ABCF3-216ENST00000485921 SPTBN5Q9NRC6 3674 aaKnown RBP25.15■■□□□ 1.62
ABCF3-216ENST00000485921 XIRP2A4UGR9 3374 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 GRXCR2A6NFK2 248 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 MBTPS2O43462 519 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 XYLBO75191 536 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 BDNFP23560 247 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 KLK7P49862 253 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 FANCCQ00597 558 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 PLD1Q13393 1074 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 SYCP1Q15431 976 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 AAK1Q2M2I8 961 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 ATAT1Q5SQI0 421 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 KLHDC7AQ5VTJ3 777 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 TMEM270Q6UE05 265 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 CYP26C1Q6V0L0 522 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 MED10Q9BTT4 135 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 CDH22Q9UJ99 828 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 DNAJC12Q9UKB3 198 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 SIK3Q9Y2K2 1263 aa25.14■■□□□ 1.62
ABCF3-216ENST00000485921 USP15Q9Y4E8 981 aaPredicted RBP25.14■■□□□ 1.62
ABCF3-216ENST00000485921 CLDN5O00501 218 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 TEX33O43247 280 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 POU2F2P09086 479 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 EPHB3P54753 998 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 ARHGAP44Q17R89 818 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 PUS10Q3MIT2 529 aaKnown RBP25.13■■□□□ 1.61
ABCF3-216ENST00000485921 ATXN2LQ8WWM7 1075 aaKnown RBP25.13■■□□□ 1.61
ABCF3-216ENST00000485921 PCMTD1Q96MG8 357 aaPredicted RBP25.13■■□□□ 1.61
ABCF3-216ENST00000485921 RIPOR3Q96MK2 946 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 NAP1L5Q96NT1 182 aaPredicted RBP25.13■■□□□ 1.61
ABCF3-216ENST00000485921 ERGIC2Q96RQ1 377 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 ZNF518BQ9C0D4 1074 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 PLCB1Q9NQ66 1216 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 FAM49BQ9NUQ9 324 aa25.13■■□□□ 1.61
ABCF3-216ENST00000485921 AJAP1Q9UKB5 411 aaPredicted RBP25.13■■□□□ 1.61
ABCF3-216ENST00000485921 A0A1B0GTH6 734 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 CCDC130P13994 396 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 MTHFRP42898 656 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 MAGEA11P43364 429 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 MRPS5P82675 430 aaKnown RBP25.12■■□□□ 1.61
ABCF3-216ENST00000485921 IQCEQ6IPM2 695 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 PTCRAQ6ISU1 281 aaPredicted RBP25.12■■□□□ 1.61
ABCF3-216ENST00000485921 VSTM1Q6UX27 236 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 FUKQ8N0W3 1084 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 ELMOD1Q8N336 334 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 SLC2A14Q8TDB8 520 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 SUSD6Q92537 303 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 CYFIP2Q96F07 1278 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 CEP72Q9P209 647 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 ATP8B3O60423 1300 aa25.12■■□□□ 1.61
ABCF3-216ENST00000485921 RNF225M0QZC1 329 aaPredicted RBP25.11■■□□□ 1.61
ABCF3-216ENST00000485921 KRT5P13647 590 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 ATF6P18850 670 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 GPR15P49685 360 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 KCNQ1P51787 676 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 RPL10AP62906 217 aaKnown RBP25.11■■□□□ 1.61
ABCF3-216ENST00000485921 DDR2Q16832 855 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 PAQR9Q6ZVX9 377 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 FAM35AQ86V20 835 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 SCN4BQ8IWT1 228 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 RBBP8NLQ8NC74 664 aaPredicted RBP25.11■■□□□ 1.61
ABCF3-216ENST00000485921 ZNF512Q96ME7 567 aaPredicted RBP25.11■■□□□ 1.61
ABCF3-216ENST00000485921 HNRNPABQ99729 332 aaKnown RBP25.11■■□□□ 1.61
ABCF3-216ENST00000485921 ANP32EQ9BTT0 268 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 FAM207AQ9NSI2 230 aaPredicted RBP25.11■■□□□ 1.61
ABCF3-216ENST00000485921 CNTN6Q9UQ52 1028 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 FHOD1Q9Y613 1164 aa25.11■■□□□ 1.61
ABCF3-216ENST00000485921 PAEPP09466 180 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 UCHL3P15374 230 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 RFX1P22670 979 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 ADORA2BP29275 332 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 GRIK1P39086 918 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 CBX2Q14781 532 aaPredicted RBP25.1■■□□□ 1.61
ABCF3-216ENST00000485921 NR1I3Q14994 352 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 SDHAF4Q5VUM1 108 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 GRASPQ7Z6J2 395 aaPredicted RBP25.1■■□□□ 1.61
ABCF3-216ENST00000485921 GIPC2Q8TF65 315 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 SHC3Q92529 594 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 NECTIN4Q96NY8 510 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 GANQ9H2C0 597 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 FAM50BQ9Y247 325 aa25.1■■□□□ 1.61
ABCF3-216ENST00000485921 NOL4O94818 638 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 CD19P15391 556 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 PTPN2P17706 415 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 ZNF132P52740 706 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 CACNA2D1P54289 1103 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 UBASH3AP57075 661 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 RAPGEF1Q13905 1077 aa25.09■■□□□ 1.61
ABCF3-216ENST00000485921 VEPH1Q14D04 833 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms