RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 HPDLQ96IR7 371 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 KIF9Q9HAQ2 790 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 TDP1Q9NUW8 608 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 RAB23Q9ULC3 237 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 CCL26Q9Y258 94 aa18.39■□□□□ 0.53
SMC4-216ENST00000485645 CEP250Q9BV73 2442 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 NOL4O94818 638 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
SMC4-216ENST00000485645 HOXD13P35453 343 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 PUM1Q14671 1186 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMC4-216ENST00000485645 CFAP221Q4G0U5 840 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 WDR44Q5JSH3 913 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 FAM26FQ5R3K3 315 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 CNNM4Q6P4Q7 775 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 Q6ZS52 159 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 MON1AQ86VX9 555 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 WDR49Q8IV35 697 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 SYNPOQ8N3V7 929 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 SNX21Q969T3 373 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 TRMT2BQ96GJ1 504 aaKnown RBP18.38■□□□□ 0.53
SMC4-216ENST00000485645 FUBP3Q96I24 572 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMC4-216ENST00000485645 C7orf25Q9BPX7 421 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 FAM83CQ9BQN1 747 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 GMEB2Q9UKD1 530 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 PTPRJQ12913 1337 aa18.38■□□□□ 0.53
SMC4-216ENST00000485645 KIF26AQ9ULI4 1882 aaPredicted RBP18.37■□□□□ 0.53
SMC4-216ENST00000485645 HCRTO43612 131 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 PAPSS2O95340 614 aaPredicted RBP18.37■□□□□ 0.53
SMC4-216ENST00000485645 RUNX3Q13761 415 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 CCINQ13939 588 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 CC2D1AQ6P1N0 951 aaPredicted RBP18.37■□□□□ 0.53
SMC4-216ENST00000485645 FAM171BQ6P995 826 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 C4orf50Q6ZRC1 276 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 EPM2AIP1Q7L775 607 aaPredicted RBP18.37■□□□□ 0.53
SMC4-216ENST00000485645 LIMS2Q7Z4I7 341 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 SCN4BQ8IWT1 228 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 RDH13Q8NBN7 331 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 MYRFLQ96LU7 910 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 SYT15Q9BQS2 421 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 AGPAT3Q9NRZ7 376 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 CDH9Q9ULB4 789 aa18.37■□□□□ 0.53
SMC4-216ENST00000485645 POLR2DO15514 142 aaKnown RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 OBSL1O75147 1896 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 TADA3O75528 432 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 HSP90AA1P07900 732 aaKnown RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 TNNI1P19237 187 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 LMO2P25791 158 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 ZNF268Q14587 947 aaPredicted RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 SNRNP35Q16560 246 aaKnown RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 CCDC142Q17RM4 750 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 TRIM68Q6AZZ1 485 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 UNC13DQ70J99 1090 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 TRAPPC11Q7Z392 1133 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 DGLUCYQ7Z3D6 616 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 KBTBD7Q8WVZ9 684 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 FNBP1Q96RU3 617 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 MMS19Q96T76 1030 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 EBF3Q9H4W6 596 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 TRPC7Q9HCX4 862 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 HPS4Q9NQG7 708 aa18.36■□□□□ 0.53
SMC4-216ENST00000485645 MAGEC2Q9UBF1 373 aaPredicted RBP18.36■□□□□ 0.53
SMC4-216ENST00000485645 UBE4BO95155 1302 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 CHURC1-FNTBB4DL54 471 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 K7ESF4 209 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 CLIC2O15247 247 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 ATP2C2O75185 946 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 ZSCAN22P10073 491 aaPredicted RBP18.35■□□□□ 0.53
SMC4-216ENST00000485645 DLATP10515 647 aaKnown RBP18.35■□□□□ 0.53
SMC4-216ENST00000485645 MAGEA11P43364 429 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 FNTBP49356 437 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 PSMC1P62191 440 aaKnown RBP18.35■□□□□ 0.53
SMC4-216ENST00000485645 SNRPFP62306 86 aaKnown RBP18.35■□□□□ 0.53
SMC4-216ENST00000485645 AMPD2Q01433 879 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 MAPRE1Q15691 268 aaKnown RBP18.35■□□□□ 0.53
SMC4-216ENST00000485645 LPAL2Q16609 132 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 RSPO4Q2I0M5 234 aaPredicted RBP18.35■□□□□ 0.53
SMC4-216ENST00000485645 LAIR1Q6GTX8 287 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 PRR23BQ6ZRT6 265 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 LONP2Q86WA8 852 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 NELFCDQ8IXH7 590 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 FSIP1Q8NA03 581 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 XXYLT1Q8NBI6 393 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 DLL3Q9NYJ7 618 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 USP18Q9UMW8 372 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 DNAH14Q0VDD8 3507 aa18.35■□□□□ 0.53
SMC4-216ENST00000485645 CACNA1AO00555 2505 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 F13A1P00488 732 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 PDGFRBP09619 1106 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 USP17L7P0C7H9 530 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 SDHBP21912 280 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 WARSP23381 471 aaKnown RBP18.34■□□□□ 0.53
SMC4-216ENST00000485645 CNR2P34972 360 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 CYP2J2P51589 502 aa18.34■□□□□ 0.53
SMC4-216ENST00000485645 FAM160A1Q05DH4 1040 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms