RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
APOE-205ENST00000485628 CHP1Q99653 195 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 LHX5Q9H2C1 402 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 HAUS4Q9H6D7 363 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CSNK1G1Q9HCP0 422 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 TMEM30AQ9NV96 361 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 MAFFQ9ULX9 164 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CDY1Q9Y6F8 540 aa16.82■□□□□ 0.28
APOE-205ENST00000485628 CLSTN1O94985 981 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 PAPLNO95428 1278 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 CYP1A1P04798 512 aaPredicted RBP16.81■□□□□ 0.28
APOE-205ENST00000485628 PLEKP08567 350 aaPredicted RBP16.81■□□□□ 0.28
APOE-205ENST00000485628 SKILP12757 684 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 OR1D2P34982 312 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 USP8P40818 1118 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 NDUFV1P49821 464 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 TSPY1Q01534 308 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 KLHL30Q0D2K2 578 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 KCNC3Q14003 757 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 TPGS2Q68CL5 300 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 GPR153Q6NV75 609 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 RNF19BQ6ZMZ0 732 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 TTC30AQ86WT1 665 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 LRRC8AQ8IWT6 810 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 ANKRD52Q8NB46 1076 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 GDPD5Q8WTR4 605 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 C2orf15Q8WU43 125 aaKnown RBP16.81■□□□□ 0.28
APOE-205ENST00000485628 SLC20A1Q8WUM9 679 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
APOE-205ENST00000485628 PCDHB18PQ96TA0 734 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 AGPAT1Q99943 283 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 ABCB6Q9NP58 842 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 PLXNA3P51805 1871 aa16.81■□□□□ 0.28
APOE-205ENST00000485628 MTMR11A4FU01 709 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 RFXAPO00287 272 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 DDX3XO00571 662 aaKnown RBP eCLIP16.8■□□□□ 0.282e-11■■■■■ 78.5
APOE-205ENST00000485628 C2CD2LO14523 706 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 MMEP08473 750 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 CCDC130P13994 396 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 ATF2P15336 505 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 ANXA13P27216 316 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 GPD2P43304 727 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 MAGEA11P43364 429 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 NFE2Q16621 373 aaPredicted RBP16.8■□□□□ 0.28
APOE-205ENST00000485628 SLC39A12Q504Y0 691 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 ZMIZ2Q8NF64 920 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 SLC22A17Q8WUG5 538 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 SLC35F5Q8WV83 523 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 MYLPFQ96A32 169 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 MRPL38Q96DV4 380 aaKnown RBP16.8■□□□□ 0.28
APOE-205ENST00000485628 UBXN6Q9BZV1 441 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 CRISPLD1Q9H336 500 aa16.8■□□□□ 0.28
APOE-205ENST00000485628 AFF4Q9UHB7 1163 aaKnown RBP16.8■□□□□ 0.28
APOE-205ENST00000485628 GREB1Q4ZG55 1949 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 CLDN5O00501 218 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 THAP12O43422 761 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 MED7O43513 233 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 MICAL2O94851 1124 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 LCA5LO95447 670 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 UNGP13051 313 aaPredicted RBP16.79■□□□□ 0.28
APOE-205ENST00000485628 PDE6CP51160 858 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 CLCN4P51793 760 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 CACNA2D1P54289 1103 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 ARID5AQ03989 594 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 PLPP4Q5VZY2 271 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 FAM35AQ86V20 835 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 PALB2Q86YC2 1186 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 ATAD1Q8NBU5 361 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 SPPL2BQ8TCT7 592 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 SLC2A14Q8TDB8 520 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 DUSP16Q9BY84 665 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 DNAI2Q9GZS0 605 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 ENTPD7Q9NQZ7 604 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 FAM49BQ9NUQ9 324 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 CYTH4Q9UIA0 394 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 TSPAN16Q9UKR8 245 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 PATJQ8NI35 1801 aa16.79■□□□□ 0.28
APOE-205ENST00000485628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 HHLA1C9JL84 531 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 CLASP2O75122 1294 aaKnown RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 GABBR2O75899 941 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 BEST1O76090 585 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 HAPLN1P10915 354 aaPredicted RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 CD19P15391 556 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 EIF4A3P38919 411 aaKnown RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 CCZ1BP86790 482 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 CCZ1P86791 482 aaPredicted RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 BMS1Q14692 1282 aaKnown RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 GRIN2CQ14957 1233 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 C4orf50Q6ZRC1 276 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 CLEC20AQ6ZU45 233 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 TMTC1Q8IUR5 882 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 GPIHBP1Q8IV16 184 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 TCEAL8Q8IYN2 117 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 STK32AQ8WU08 396 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 SMOQ99835 787 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms