RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 CPA6Q8N4T0 437 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
SSR4-210ENST00000485612 OLIG1Q8TAK6 271 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 USP13Q92995 863 aaPredicted RBP13.19□□□□□ -0.3
SSR4-210ENST00000485612 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 CAMK1GQ96NX5 476 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 LPIN3Q9BQK8 851 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
SSR4-210ENST00000485612 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 PTPRDP23468 1912 aa13.19□□□□□ -0.3
SSR4-210ENST00000485612 MTMR11A4FU01 709 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 M0QZQ0 153 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 SH3BP5O60239 455 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 PLA2G4BP0C869 781 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 ITPKAP23677 461 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 MATR3P43243 847 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSR4-210ENST00000485612 MCL1Q07820 350 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 STRN3Q13033 797 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 TAF12Q16514 161 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 TMEM119Q4V9L6 283 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
SSR4-210ENST00000485612 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
SSR4-210ENST00000485612 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
SSR4-210ENST00000485612 USP37Q86T82 979 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 MINDY1Q8N5J2 469 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 TTC9BQ8N6N2 239 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 MAB21L3Q8N8X9 362 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 ECT2Q9H8V3 914 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 KIF9Q9HAQ2 790 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 C17orf75Q9HAS0 396 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 TDP1Q9NUW8 608 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 DKK4Q9UBT3 224 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 RAI2Q9Y5P3 530 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 CACNA1EQ15878 2313 aa13.18□□□□□ -0.3
SSR4-210ENST00000485612 TTC26A0AVF1 554 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 CLDN3O15551 220 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 FAM189A1O60320 539 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
SSR4-210ENST00000485612 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
SSR4-210ENST00000485612 SERPINF2P08697 491 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 HOXD12P35452 270 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 P2RY2P41231 377 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 SEC13P55735 322 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 ZBTB6Q15916 424 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 CRY1Q16526 586 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 ZPBP2Q6X784 338 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 CCDC33Q8N5R6 958 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 OR2I1PQ8NGU4 316 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 BICD1Q96G01 975 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 TIPINQ9BVW5 301 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
SSR4-210ENST00000485612 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
SSR4-210ENST00000485612 MAST4O15021 2626 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 MYOFQ9NZM1 2061 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 ARHGAP33O14559 1287 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR4-210ENST00000485612 LRPAP1P30533 357 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR4-210ENST00000485612 CDR1P51861 262 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 MYBPC2Q14324 1141 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 ENOX2Q16206 610 aaKnown RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 POLMQ9NP87 494 aaPredicted RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
SSR4-210ENST00000485612 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
SSR4-210ENST00000485612 A0A087WV48 116 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 K7EQS6 105 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
SSR4-210ENST00000485612 SYPP08247 313 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 CLTAP09496 248 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 SMTNP53814 917 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 GRIN1Q05586 938 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 NR1H3Q13133 447 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
SSR4-210ENST00000485612 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms