RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 LMBR1Q8WVP7 490 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 WNT8BQ93098 351 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 IFT43Q96FT9 208 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 FAM20AQ96MK3 541 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TGS1Q96RS0 853 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 GAS2L1Q99501 681 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PHF20Q9BVI0 1012 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 NFKBIZQ9BYH8 718 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TXLNGYQ9BZA5 131 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 XAB2Q9HCS7 855 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ERVK-5Q9HDB9 667 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 JPH1Q9HDC5 661 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 KCNMB3Q9NPA1 279 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LATS2Q9NRM7 1088 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PCDHA4Q9UN74 947 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PCDHB5Q9Y5E4 795 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 GOLGA8AA7E2F4 631 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 GOLGA8BA8MQT2 603 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 DDX3XO00571 662 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 EFEMP2O95967 443 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TPM3P06753 285 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ADRB2P07550 413 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 HOXA13P31271 388 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TCF7P36402 384 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 KCNJ6P48051 423 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 NSUN2Q08J23 767 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ITGB3BPQ13352 177 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 COL9A3Q14050 684 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 KCNB1Q14721 858 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 SIMC1Q8NDZ2 872 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 Q8NFD4 153 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ZNF845Q96IR2 970 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ZSCAN31Q96LW9 406 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LLPHQ9BRT6 129 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LSM14BQ9BX40 385 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 NKX2-4Q9H2Z4 354 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 GHITMQ9H3K2 345 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ZWILCHQ9H900 591 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LIN28AQ9H9Z2 209 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 RGS18Q9NS28 235 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TRPV2Q9Y5S1 764 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LINC01553A4QN01 128 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 SMCO2A6NFE2 343 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ATP9AO75110 1047 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 CYP2C9P11712 490 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 FOSL2P15408 326 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 STMN1P16949 149 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 POU3F2P20265 443 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PEX2P28328 305 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MTHFRP42898 656 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 METAP2P50579 478 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 CRYBB1P53674 252 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ACTR2P61160 394 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MRPS5P82675 430 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ADGRE1Q14246 886 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 LPIN1Q14693 890 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 GRIK4Q16099 956 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PROX2Q3B8N5 592 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 RAB12Q6IQ22 244 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MIS18BP1Q6P0N0 1132 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 USP17L6PQ6QN14 398 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 VHLLQ6RSH7 139 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MTHFD1LQ6UB35 978 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 KDELC1Q6UW63 502 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ARHGEF18Q6ZSZ5 1173 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 AHI1Q8N157 1196 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ETNPPLQ8TBG4 499 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ATP6V0A1Q93050 837 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 MRPL38Q96DV4 380 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 NUCKS1Q9H1E3 243 aaKnown RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 HECAQ9UBI9 543 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-205ENST00000485055 PCDHGB4Q9UN71 923 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 SRPK3Q9UPE1 567 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 ANGPTL3Q9Y5C1 460 aa5.69□□□□□ -1.5
CCDC39-205ENST00000485055 TRBV23-1A0A0A0MS06 115 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 KLF18A0A0U1RQI7 1052 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SOCS5O75159 536 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 GPR32O75388 356 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 PAGE1O75459 146 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CDKL5O76039 1030 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 SNX4O95219 450 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 C22orf31O95567 290 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 MMP1P03956 469 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 BMP1P13497 986 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 TIGD5Q53EQ6 642 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 IER5Q5VY09 327 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 JMJD6Q6NYC1 403 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 Q6ZUG5 572 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CYFIP1Q7L576 1253 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 KRT25Q7Z3Z0 450 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CCDC91Q7Z6B0 441 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 GRAMD1CQ8IYS0 662 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 NUP93Q8N1F7 819 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 NANOS1Q8WY41 292 aaKnown RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 GPKOWQ92917 476 aaPredicted RBP eCLIP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 TCEANC2Q96MN5 208 aa5.68□□□□□ -1.5
CCDC39-205ENST00000485055 CDCA3Q99618 268 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-205ENST00000485055 ADAMTS10Q9H324 1103 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms