RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 GREB1Q4ZG55 1949 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 A0A1W2PRU2 124 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 SOBPA7XYQ1 873 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 BIN1O00499 593 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 NOL4O94818 638 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 HMGA1P17096 107 aaKnown RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 PTPN1P18031 435 aaKnown RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 GABRR2P28476 465 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 WEE1P30291 646 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 NOP14P78316 857 aaKnown RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 PAK1Q13153 545 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 TEAD2Q15562 447 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 TAF12Q16514 161 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 FBXL6Q8N531 539 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 B3GALNT2Q8NCR0 500 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 CCDC150Q8NCX0 1101 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 FBXL13Q8NEE6 735 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 SMARCD2Q92925 531 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 PBXIP1Q96AQ6 731 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 E2F7Q96AV8 911 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 TRMT2BQ96GJ1 504 aaKnown RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 SPATA17Q96L03 361 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 MYRFLQ96LU7 910 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 DUSP9Q99956 384 aaKnown RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 SDCBP2Q9H190 292 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 IL21Q9HBE4 155 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 ZFP14Q9HCL3 533 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 LMBRD1Q9NUN5 540 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 UXTQ9UBK9 157 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
COL16A1-213ENST00000482910 NUP210Q8TEM1 1887 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-213ENST00000482910 NRG2O14511 850 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-213ENST00000482910 TRIM66O15016 1216 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 PMM2O15305 246 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 NARSO43776 548 aaKnown RBP16.11■□□□□ 0.17
COL16A1-213ENST00000482910 CLSTN1O94985 981 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 FCARP24071 287 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 ASPAP45381 313 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 CDH8P55286 799 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 INCA1Q0VD86 236 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 CAMK4Q16566 473 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 CCDC142Q17RM4 750 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 ARHGAP15Q53QZ3 475 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 MDH1BQ5I0G3 518 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 FAM78AQ5JUQ0 283 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 GIPC2Q8TF65 315 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 GCNAQ96QF7 691 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 RPP25Q9BUL9 199 aaKnown RBP16.11■□□□□ 0.17
COL16A1-213ENST00000482910 ELOVL4Q9GZR5 314 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 ATXN3LQ9H3M9 355 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
COL16A1-213ENST00000482910 RAB20Q9NX57 234 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
COL16A1-213ENST00000482910 OBSL1O75147 1896 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 FGFR1OPO95684 399 aaKnown RBP16.1■□□□□ 0.17
COL16A1-213ENST00000482910 GNA14O95837 355 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 F11P03951 625 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 GJA1P17302 382 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 BDNFP23560 247 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 DDX6P26196 483 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL16A1-213ENST00000482910 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
COL16A1-213ENST00000482910 PFKPQ01813 784 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 CYP27A1Q02318 531 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 DDR2Q16832 855 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 DCAF17Q5H9S7 520 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-213ENST00000482910 TCERG1LQ5VWI1 586 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 TANGO2Q6ICL3 276 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 SPOPLQ6IQ16 392 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 CRYBG2Q8N1P7 616 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 TTC39CQ8N584 583 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 ZSCAN18Q8TBC5 510 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-213ENST00000482910 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 C8orf48Q96LL4 319 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 ZSWIM3Q96MP5 696 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 DPEP3Q9H4B8 488 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 TASP1Q9H6P5 420 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 EHD2Q9NZN4 543 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 ARIH1Q9Y4X5 557 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-213ENST00000482910 ATP8B3O60423 1300 aa16.1■□□□□ 0.17
COL16A1-213ENST00000482910 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 TRIM21P19474 475 aaKnown RBP16.09■□□□□ 0.17
COL16A1-213ENST00000482910 GPR15P49685 360 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 CDR1P51861 262 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 NLRP12P59046 1061 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 CBWD6Q4V339 395 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 CBWD3Q5JTY5 395 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 CBWD5Q5RIA9 395 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 TMEM150AQ86TG1 271 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 SCN4BQ8IWT1 228 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 SUGP1Q8IWZ8 645 aaKnown RBP16.09■□□□□ 0.17
COL16A1-213ENST00000482910 MLKLQ8NB16 471 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 KXD1Q9BQD3 176 aa16.09■□□□□ 0.17
COL16A1-213ENST00000482910 B3GNT5Q9BYG0 378 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms