RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 CFAP47Q6ZTR5 3102 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 H3BQV1 296 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 FAM189A1O60320 539 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ZNF806P0C7X5 589 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ARSAP15289 507 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 HOXA6P31267 233 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 GPR15P49685 360 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 LIMK1P53667 647 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 AMPD2Q01433 879 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ARSHQ5FYA8 562 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 TMEM196Q5HYL7 178 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 SDHAF4Q5VUM1 108 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 RNF43Q68DV7 783 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 TXNDC8Q6A555 127 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ADALQ6DHV7 355 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 TCEAL6Q6IPX3 200 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 DCP1BQ8IZD4 617 aaKnown RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 C2orf15Q8WU43 125 aaKnown RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 MRPS31Q92665 395 aaKnown RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 TCEAL3Q969E4 200 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ZFRQ96KR1 1074 aaKnown RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ZNF560Q96MR9 790 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 PI4K2AQ9BTU6 479 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 SLC46A2Q9BY10 475 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 KIF9Q9HAQ2 790 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 HPS4Q9NQG7 708 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 DPP3Q9NY33 737 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 CPSF3Q9UKF6 684 aaKnown RBP11.12□□□□□ -0.63
DDX39B-220ENST00000482195 PCDHB5Q9Y5E4 795 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 ABCA7Q8IZY2 2146 aa11.12□□□□□ -0.63
DDX39B-220ENST00000482195 A0A0B4J269 797 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 TISP43B9A030 160 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 PIRO00625 290 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 PIGRP01833 764 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 CYP11A1P05108 521 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 PAX3P23760 479 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 DDX6P26196 483 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 WEE1P30291 646 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 GBP1P32455 592 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 UBA7P41226 1012 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 RAP1GAPP47736 663 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 IFNAR2P48551 515 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 NLRP12P59046 1061 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 CREB5Q02930 508 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 ELF2Q15723 593 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 SV2CQ496J9 727 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 NAIF1Q69YI7 327 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 PSAPL1Q6NUJ1 521 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 SLC39A4Q6P5W5 647 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 CPA6Q8N4T0 437 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 RPLP0P6Q8NHW5 317 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 NOC3LQ8WTT2 800 aaKnown RBP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 CHFRQ96EP1 664 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 CALR3Q96L12 384 aaKnown RBP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 P2RY13Q9BPV8 354 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 EDEM2Q9BV94 578 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 TDP1Q9NUW8 608 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 ZMYM5Q9UJ78 669 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
DDX39B-220ENST00000482195 DERAQ9Y315 318 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 FAM208BQ5VWN6 2430 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 CHD6Q8TD26 2715 aa11.11□□□□□ -0.63
DDX39B-220ENST00000482195 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 OTOL1A6NHN0 477 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-220ENST00000482195 ANKRD63C9JTQ0 380 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 TK2O00142 265 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 TRDMT1O14717 391 aaKnown RBP11.1□□□□□ -0.63
DDX39B-220ENST00000482195 DCLK1O15075 740 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 RHOBTB1O94844 696 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 PLCG1P19174 1290 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 DRD1P21728 446 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 SCP2P22307 547 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 PMLP29590 882 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 SMARCB1Q12824 385 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 MTF1Q14872 753 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 KARSQ15046 597 aaKnown RBP11.1□□□□□ -0.63
DDX39B-220ENST00000482195 ZC2HC1CQ53FD0 456 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-220ENST00000482195 ARL6IP4Q66PJ3 421 aaKnown RBP11.1□□□□□ -0.63
DDX39B-220ENST00000482195 LRRTM3Q86VH5 581 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 TTC30AQ86WT1 665 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 POMGNT1Q8WZA1 660 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 RAD54LQ92698 747 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 GLMNQ92990 594 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 ACDQ96AP0 544 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 FAM83CQ9BQN1 747 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 ASB7Q9H672 318 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 VPS45Q9NRW7 570 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 DUS2Q9NX74 493 aaKnown RBP11.1□□□□□ -0.63
DDX39B-220ENST00000482195 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 PCDHGA5Q9Y5G8 931 aa11.1□□□□□ -0.63
DDX39B-220ENST00000482195 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms