RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 SMAD1Q15797 465 aaKnown RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 SGSM1Q2NKQ1 1148 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 TRIM61Q5EBN2 209 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 DGKKQ5KSL6 1271 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 BEND6Q5SZJ8 279 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 THEMIS2Q5TEJ8 643 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 EMC10Q5UCC4 262 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 CREB3L3Q68CJ9 461 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 PMS2CLQ68D20 193 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 XKR5Q6UX68 686 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 PI16Q6UXB8 463 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 Q6ZS52 159 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 DDX53Q86TM3 631 aaKnown RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 FCHSD1Q86WN1 690 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 MARCH9Q86YJ5 346 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 CAMKK1Q8N5S9 505 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 MSANTD4Q8NCY6 345 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 VPS37AQ8NEZ2 397 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 DNERQ8NFT8 737 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 CACTINQ8WUQ7 758 aaKnown RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 PHKBQ93100 1093 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 NAF1Q96HR8 494 aaKnown RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 CASD1Q96PB1 797 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 TSC22D3Q99576 134 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 SENP7Q9BQF6 1050 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 NUSAP1Q9BXS6 441 aaKnown RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 LRRCC1Q9C099 1032 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 NT5C3AQ9H0P0 336 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 RSPH9Q9H1X1 276 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 CD248Q9HCU0 757 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 MAN1C1Q9NR34 630 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 RTEL1Q9NZ71 1219 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 SCHIP1Q9P0W5 487 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 LRP2BPQ9P2M1 347 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 HOOK1Q9UJC3 728 aaKnown RBP5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 PNMA2Q9UL42 364 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 N6AMT1Q9Y5N5 214 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 USP3Q9Y6I4 520 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 MYH4Q9Y623 1939 aa5.79□□□□□ -1.48
TRAPPC10-209ENST00000481460 VWA8A3KMH1 1905 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 HELZP42694 1942 aaKnown RBP5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MYLKQ15746 1914 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 FIGNL2A6NMB9 653 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 FAM25EA8MYX2 175 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 C9IYK1 514 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 PRC1O43663 620 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SH3BP5O60239 455 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 OPHN1O60890 802 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 RFPL2O75678 378 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MBD4O95243 580 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 CNPP09543 421 aaKnown RBP5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 NAT2P11245 290 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 ALAS1P13196 640 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SNRPBP14678 240 aaKnown RBP5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 ITGB6P18564 788 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 KLRC2P26717 231 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TXLNAP40222 546 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 PBX3P40426 434 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 CCNG1P51959 295 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 EVCP57679 992 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 NLRP5P59047 1200 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SRSF11Q05519 484 aaKnown RBP5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 LRMPQ12912 555 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 RTP5Q14D33 572 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TLR1Q15399 786 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MAPK6Q16659 721 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SPDYCQ5MJ68 293 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SH2D4BQ5SQS7 431 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 ARMC3Q5W041 872 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 ZNF787Q6DD87 383 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 FAAH2Q6GMR7 532 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 CCDC70Q6NSX1 233 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TAF2Q6P1X5 1199 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 C1orf228Q6PIY5 440 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 OLFML1Q6UWY5 402 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 NSMFQ6X4W1 530 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MAATS1Q7Z4T9 603 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TMEM110Q86TL2 294 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MYO1HQ8N1T3 1032 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 EXD3Q8N9H8 876 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 KNL1Q8NG31 2342 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SPATA3Q8NHX4 192 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 PPP1R14CQ8TAE6 165 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SPATA20Q8TB22 786 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 IRGQQ8WZA9 623 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TAF4BQ92750 862 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 FGF13Q92913 245 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 FGF11Q92914 225 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 LRRC45Q96CN5 670 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 NXPE2Q96DL1 559 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MOCOSQ96EN8 888 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TRIM11Q96F44 468 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 CAMK1GQ96NX5 476 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 SMC6Q96SB8 1091 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 CGREF1Q99674 301 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 KXD1Q9BQD3 176 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 EMILIN2Q9BXX0 1053 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 TMEM117Q9H0C3 514 aa5.78□□□□□ -1.48
TRAPPC10-209ENST00000481460 MRPL46Q9H2W6 279 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms