RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TALDO1P37837 337 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 PTPN21Q16825 1174 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CYP51A1Q16850 503 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 IL31Q6EBC2 164 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 GPR141Q7Z602 305 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 EXOSC4Q9NPD3 245 aaKnown RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 DMAP1Q9NPF5 467 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 hCG_2014768A0A024R1R8 64 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CAND2O75155 1236 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 VSNL1P62760 191 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SLC9A5Q14940 896 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SHROOM1Q2M3G4 852 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 C3orf62Q6ZUJ4 267 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 ANKMY2Q8IV38 441 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SEPT12Q8IYM1 358 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CCDC88AQ3V6T2 1871 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SEC16AO15027 2179 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SEC24DO94855 1032 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SOAT1P35610 550 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SLC11A2P49281 568 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 TRIP10Q15642 601 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 APOL5Q9BWW9 433 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 A0A1W2PQJ5 194 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 TSC22D4Q9Y3Q8 395 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 NBPF26B4DH59 902 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 PPP2R1BP30154 601 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 DGKDQ16760 1214 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 IPMKQ8NFU5 416 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 RIN3Q8TB24 985 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 AGR3Q8TD06 166 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 AGAP3Q96P47 875 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 PDZK1P1A8MUH7 402 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 TIMM44O43615 452 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CYP2C8P10632 490 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 LDHDQ86WU2 507 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SP8Q8IXZ3 490 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 ZNF333Q96JL9 665 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 BBS2Q9BXC9 721 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 PCDHB7Q9Y5E2 793 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 LRRC14Q15048 493 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 USP39Q53GS9 565 aaKnown RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 MRNIPQ6NTE8 343 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SEPT1Q8WYJ6 367 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 WHRNQ9P202 907 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SRP68Q9UHB9 627 aaKnown RBP9.91□□□□□ -0.82
VEGFA-212ENST00000480614 TRIM13O60858 407 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CNGA2Q16280 664 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 CYP4Z2PQ8N1L4 340 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SYNE4Q8N205 404 aa9.91□□□□□ -0.82
VEGFA-212ENST00000480614 SAC3D1A6NKF1 404 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SDR42E2A6NKP2 422 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 NFIBO00712 420 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 TGM2P21980 687 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CNTFP26441 200 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CAMK2GQ13555 558 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SEPT5Q99719 369 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 MANSC1Q9H8J5 431 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 FRMPD1Q5SYB0 1578 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SLCO1B7G3V0H7 640 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 STRNO43815 780 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 NBNO60934 754 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 C1DQ13901 141 aaKnown RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ATF7IP2Q5U623 682 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 TIGD7Q6NT04 549 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 RMND5BQ96G75 393 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 TDRD3Q9H7E2 651 aaKnown RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 PRDM5Q9NQX1 630 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SVILO95425 2214 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 TULP4Q9NRJ4 1543 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SF3B1O75533 1304 aaKnown RBP eCLIP9.9□□□□□ -0.826e-7■■■■■ 31.1
VEGFA-212ENST00000480614 TM9SF1O15321 606 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CD2BP2O95400 341 aaKnown RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 GPD1P21695 349 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 PTGER2P43116 358 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 GEMP55040 296 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 TBL3Q12788 808 aaKnown RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SLC20A1Q8WUM9 679 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 OLFM1Q99784 485 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CARD9Q9H257 536 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SNX9Q9Y5X1 595 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 LRRC7Q96NW7 1537 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 HOXA2O43364 376 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 ATXN3P54252 364 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CORO7P57737 925 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SKP1P63208 163 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 RBBP8NLQ8NC74 664 aaPredicted RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 PPP1R36Q96LQ0 422 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 MAGEA4P43358 317 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 AMPD2Q01433 879 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 CHRNB3Q05901 458 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 SLC20A2Q08357 652 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 TDRD10Q5VZ19 366 aaKnown RBP9.9□□□□□ -0.82
VEGFA-212ENST00000480614 C10orf53Q8N6V4 93 aa9.9□□□□□ -0.82
VEGFA-212ENST00000480614 HPDLQ96IR7 371 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms