RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CNPP09543 421 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 CDH5P33151 784 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 OR1D2P34982 312 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 MAGEA11P43364 429 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 BCAT1P54687 386 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 FMO1Q01740 532 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 ARID5AQ03989 594 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 PKDCCQ504Y2 493 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 TDRD12Q587J7 1177 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 PPP1R26Q5T8A7 1209 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 PLPP4Q5VZY2 271 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 TRIM72Q6ZMU5 477 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 PAQR9Q6ZVX9 377 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 FAM35AQ86V20 835 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF461Q8TAF7 563 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 AUTS2Q8WXX7 1259 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 CYFIP2Q96F07 1278 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 KLHL5Q96PQ7 755 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 LHX5Q9H2C1 402 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 HAUS4Q9H6D7 363 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 CERS4Q9HA82 394 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 FAM49BQ9NUQ9 324 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
TRAPPC12-218ENST00000479897 VNN2O95498 520 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 CXCL14O95715 111 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 LSM8O95777 96 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 SETSIPP0DME0 302 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 CCDC130P13994 396 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 ATF2P15336 505 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 CHRNB2P17787 502 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 RPL17P18621 184 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 IRS1P35568 1242 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 PTPROQ16827 1216 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 ASTE1Q2TB18 679 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 VSTM1Q6UX27 236 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 CYP26C1Q6V0L0 522 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF571Q7Z3V5 609 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 TTC30AQ86WT1 665 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 SLC2A14Q8TDB8 520 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 SLC20A1Q8WUM9 679 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 MRPL38Q96DV4 380 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 B3GNT5Q9BYG0 378 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 TTYH1Q9H313 450 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 PNPLA8Q9NP80 782 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 LMCD1Q9NZU5 365 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 HESX1Q9UBX0 185 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 GREB1Q4ZG55 1949 aa13.3□□□□□ -0.28
TRAPPC12-218ENST00000479897 HIDE1A8MVS5 230 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 SOX1O00570 391 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 MICAL2O94851 1124 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 CALCAP01258 141 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 CYP1A1P04798 512 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 MMEP08473 750 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 PLEKP08567 350 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 SKILP12757 684 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 NPR3P17342 541 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 POU3F3P20264 500 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 GOLGA7BQ2TAP0 167 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 PPP1R2P3Q6NXS1 205 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 LILRA6Q6PI73 481 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 CLEC20AQ6ZU45 233 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 RTL10Q7L3V2 364 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 TCEAL8Q8IYN2 117 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 SLC30A5Q8TAD4 765 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 CEP295NLQ96MC4 621 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 BAG1Q99933 345 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 LPIN3Q9BQK8 851 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 DUSP16Q9BY84 665 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 ZNF518BQ9C0D4 1074 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 KRT82Q9NSB4 513 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 NENFQ9UMX5 172 aa13.29□□□□□ -0.28
TRAPPC12-218ENST00000479897 M0QYV0 167 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 FAM200BP0CF97 657 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 GZMAP12544 262 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 ADORA2BP29275 332 aa13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 EIF4A3P38919 411 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-218ENST00000479897 GPD2P43304 727 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms