RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 FAM189A1O60320 539 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 NFICP08651 508 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 PLS3P13797 630 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 FAM160A1Q05DH4 1040 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 NBR1Q14596 966 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 LPCAT2Q7L5N7 544 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 SYT12Q8IV01 421 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 FAM212AQ96EL1 285 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 BICD1Q96G01 975 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 CYP2S1Q96SQ9 504 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 TRPC7Q9HCX4 862 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 TMLHEQ9NVH6 421 aa18.73■□□□□ 0.59
HMGN1-212ENST00000479586 MBD1Q9UIS9 605 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-212ENST00000479586 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-212ENST00000479586 ADAMTS9Q9P2N4 1935 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 BPTFQ12830 3046 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 UPK3BL1B0FP48 263 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 UPK3BL2E5RIL1 263 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 PIRO00625 290 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 ZIC2O95409 532 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-212ENST00000479586 ADRB2P07550 413 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 P2RY2P41231 377 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 SAFBQ15424 915 aaKnown RBP eCLIP18.72■□□□□ 0.59
HMGN1-212ENST00000479586 CRY1Q16526 586 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 COL28A1Q2UY09 1125 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 WSCD1Q658N2 575 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 TMEM92Q6UXU6 159 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 IGSF22Q8N9C0 903 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 PYM1Q9BRP8 204 aaKnown RBP18.72■□□□□ 0.59
HMGN1-212ENST00000479586 RPF1Q9H9Y2 349 aaKnown RBP18.72■□□□□ 0.59
HMGN1-212ENST00000479586 DSEQ9UL01 958 aa18.72■□□□□ 0.59
HMGN1-212ENST00000479586 ANO9A1A5B4 782 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 H0Y626 953 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 CYB561D2O14569 222 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 TRIM16O95361 564 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 PAX3P23760 479 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 GUCY2CP25092 1073 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 CDC25AP30304 524 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 OPRD1P41143 372 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 SMTNP53814 917 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 SCAPQ12770 1279 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 SMARCB1Q12824 385 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 SLC23A3Q6PIS1 610 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 RAB44Q7Z6P3 723 aaPredicted RBP18.71■□□□□ 0.59
HMGN1-212ENST00000479586 METTL23Q86XA0 190 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 EFCAB13Q8IY85 973 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 THEM5Q8N1Q8 247 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 CCDC26Q8TAB7 109 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 PI4K2AQ9BTU6 479 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 TIPINQ9BVW5 301 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 GTPBP2Q9BX10 602 aaKnown RBP18.71■□□□□ 0.59
HMGN1-212ENST00000479586 LINC00597Q9H2U6 94 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 PCDHB5Q9Y5E4 795 aa18.71■□□□□ 0.59
HMGN1-212ENST00000479586 APC2O95996 2303 aa18.71■□□□□ 0.58
HMGN1-212ENST00000479586 OGTO15294 1046 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 MAP3K13O43283 966 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
HMGN1-212ENST00000479586 SEC24BO95487 1268 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 CFIP05156 583 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 CKMP06732 381 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 CSH1P0DML2 217 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 CSH2P0DML3 217 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 ACACAQ13085 2346 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 PDIA5Q14554 519 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 GAB4Q2WGN9 574 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 ZC2HC1CQ53FD0 456 aaPredicted RBP18.7■□□□□ 0.58
HMGN1-212ENST00000479586 LYSMD4Q5XG99 296 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 SFTPA1Q8IWL2 248 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 TSPAN18Q96SJ8 248 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 TMEM206Q9H813 350 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 TCHHQ07283 1943 aa18.7■□□□□ 0.58
HMGN1-212ENST00000479586 TRAV19A0A0A6YYK7 116 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 ALDH1A2O94788 518 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 USP17L7P0C7H9 530 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 ITPKAP23677 461 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 RDXP35241 583 aaKnown RBP18.69■□□□□ 0.58
HMGN1-212ENST00000479586 LIG4P49917 911 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 ST3GAL1Q11201 340 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 NR1H3Q13133 447 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 TMEM132DQ14C87 1099 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 KYAT1Q16773 422 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 DDR2Q16832 855 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 DCP1BQ8IZD4 617 aaKnown RBP18.69■□□□□ 0.58
HMGN1-212ENST00000479586 HDDC3Q8N4P3 179 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 ALLCQ8N6M5 410 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 SH3RF2Q8TEC5 729 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 MMTAG2Q9BU76 263 aaKnown RBP18.69■□□□□ 0.58
HMGN1-212ENST00000479586 PILRBQ9UKJ0 227 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 STK24Q9Y6E0 443 aa18.69■□□□□ 0.58
HMGN1-212ENST00000479586 PLXND1Q9Y4D7 1925 aa18.68■□□□□ 0.58
HMGN1-212ENST00000479586 NPHP3-ACAD11A0A0J9YXS1 232 aa18.68■□□□□ 0.58
HMGN1-212ENST00000479586 HNRNPDLO14979 420 aaKnown RBP18.68■□□□□ 0.58
HMGN1-212ENST00000479586 NOL4O94818 638 aa18.68■□□□□ 0.58
HMGN1-212ENST00000479586 CHRM1P11229 460 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-212ENST00000479586 ATXN3P54252 364 aaPredicted RBP18.68■□□□□ 0.58
HMGN1-212ENST00000479586 ZNF423Q2M1K9 1284 aa18.68■□□□□ 0.58
HMGN1-212ENST00000479586 MAP7D1Q3KQU3 841 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms