RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SLC22A12Q96S37 553 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 NELL2Q99435 816 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 ACBD6Q9BR61 282 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 GZF1Q9H116 711 aaPredicted RBP18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 CHRDQ9H2X0 955 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 R3HCC1Q9Y3T6 440 aaKnown RBP18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 GTF3C3Q9Y5Q9 886 aa18.64■□□□□ 0.57
ECHDC1-216ENST00000479525 EP300Q09472 2414 aaPredicted RBP18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 OTOL1A6NHN0 477 aaPredicted RBP18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 KLRC4O43908 158 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 CLSTN1O94985 981 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 ARSAP15289 507 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 BDNFP23560 247 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 CTHP32929 405 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 DUOXA2Q1HG44 320 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 TMEM86AQ8N2M4 240 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 TOP6BLQ8N6T0 577 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 SUMF1Q8NBK3 374 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 USP13Q92995 863 aaPredicted RBP18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 CGRRF1Q99675 332 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 DPEP3Q9H4B8 488 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 EBF3Q9H4W6 596 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 PRMT8Q9NR22 394 aaPredicted RBP18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 GKN1Q9NS71 199 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 POLR3BQ9NW08 1133 aaPredicted RBP18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 FBXO4Q9UKT5 387 aa18.63■□□□□ 0.57
ECHDC1-216ENST00000479525 RALGAPA1Q6GYQ0 2036 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 GVINP1Q7Z2Y8 2422 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 GABRDO14764 452 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 ACTN4O43707 911 aaKnown RBP18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 FGF19O95750 216 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 CYP27A1Q02318 531 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 MYO1EQ12965 1108 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 SRSF5Q13243 272 aaKnown RBP18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 NFE2Q16621 373 aaPredicted RBP18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 MDH1BQ5I0G3 518 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 HEATR6Q6AI08 1181 aaKnown RBP18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 PKN3Q6P5Z2 889 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 XXYLT1Q8NBI6 393 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 E2F7Q96AV8 911 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 FNBP1Q96RU3 617 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 TRPV5Q9NQA5 729 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 HPS4Q9NQG7 708 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.62■□□□□ 0.572e-6■■■■■ 96.1
ECHDC1-216ENST00000479525 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 KIAA1549LQ6ZVL6 1849 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 EML5Q05BV3 1969 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 ZNF292O60281 2723 aa18.62■□□□□ 0.57
ECHDC1-216ENST00000479525 MYOFQ9NZM1 2061 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 C2orf78A6NCI8 922 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 PRR29P0C7W0 189 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 CSH1P0DML2 217 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 CSH2P0DML3 217 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 PFKFB1P16118 471 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 AVPR1AP37288 418 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 MAGEA9P43362 315 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 RAP1GAPP47736 663 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 LHX1P48742 406 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 CACNA2D1P54289 1103 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 MYL6P60660 151 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 USP46P62068 366 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 IFRD2Q12894 506 aaPredicted RBP18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 STK4Q13043 487 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 CNNM4Q6P4Q7 775 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 SCARA5Q6ZMJ2 495 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 CEP57L1Q8IYX8 460 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 KIAA0895Q8NCT3 520 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 ATRIPQ8WXE1 791 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 PAGE5Q96GU1 130 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 NXF1Q9UBU9 619 aaKnown RBP18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 RCOR1Q9UKL0 485 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 OTOGLQ3ZCN5 2332 aa18.61■□□□□ 0.57
ECHDC1-216ENST00000479525 CLDN5O00501 218 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 SCAMP3O14828 347 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 KIAA0391O15091 583 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 TDGF1P13385 188 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 PCSK1P29120 753 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 RPL10AP62906 217 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 SMARCB1Q12824 385 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 PSMD6Q15008 389 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 KMT5BQ4FZB7 885 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 CELF5Q8N6W0 485 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 ARL14EPQ8N8R7 260 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 OR6B3Q8NGW1 331 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 MRPS31Q92665 395 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 CHFRQ96EP1 664 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 TMEM30AQ9NV96 361 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 ZSCAN32Q9NX65 697 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 DNAH14Q0VDD8 3507 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 UBE4BO95155 1302 aa18.6■□□□□ 0.57
ECHDC1-216ENST00000479525 GPR179Q6PRD1 2367 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 CHURC1-FNTBB4DL54 471 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 EXOC3O60645 756 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 NOL4O94818 638 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 WARSP23381 471 aaKnown RBP18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 GRIK1P39086 918 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms