RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PXNP49023 591 aaPredicted RBP14.22□□□□□ -0.13
VCL-205ENST00000478896 RBP5P82980 135 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 MTF1Q14872 753 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 PDGFRLQ15198 375 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 AASDHQ4L235 1098 aaPredicted RBP14.22□□□□□ -0.13
VCL-205ENST00000478896 PPM1JQ5JR12 505 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 FSTL4Q6MZW2 842 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 FAM173BQ6P4H8 233 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 MON1AQ86VX9 555 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 SCN4BQ8IWT1 228 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 GPD1LQ8N335 351 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 CPA6Q8N4T0 437 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 FSIP1Q8NA03 581 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 C12orf50Q8NA57 414 aaPredicted RBP14.22□□□□□ -0.13
VCL-205ENST00000478896 FAM84AQ96KN4 292 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 TMEM206Q9H813 350 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 PDE11AQ9HCR9 933 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 ABCB6Q9NP58 842 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 PANK4Q9NVE7 773 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 GTF3C4Q9UKN8 822 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 CACNA1AO00555 2505 aa14.22□□□□□ -0.13
VCL-205ENST00000478896 ZNF292O60281 2723 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 HELZP42694 1942 aaKnown RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 TRAV19A0A0A6YYK7 116 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 OTOL1A6NHN0 477 aaPredicted RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 SOBPA7XYQ1 873 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 TRDMT1O14717 391 aaKnown RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 AXIN1O15169 862 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 GDF9O60383 454 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 TADA3O75528 432 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 NOL4O94818 638 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 PRPF6O94906 941 aaKnown RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 EGFP01133 1207 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 IFNAR2P48551 515 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 LHX1P48742 406 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 FAM160A1Q05DH4 1040 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 MYO1EQ12965 1108 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 RESTQ13127 1097 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 PSMD2Q13200 908 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 ZNF268Q14587 947 aaPredicted RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 KCNB1Q14721 858 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 LMBRD2Q68DH5 695 aaPredicted RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 IL31Q6EBC2 164 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 STXBP4Q6ZWJ1 553 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 CCDC65Q8IXS2 484 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 TOP6BLQ8N6T0 577 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 PDILTQ8N807 584 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 RIN3Q8TB24 985 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 SPATA18Q8TC71 538 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 GAB3Q8WWW8 586 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 TRMT2BQ96GJ1 504 aaKnown RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 P2RY13Q9BPV8 354 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 FGFBP2Q9BYJ0 223 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 PANK2Q9BZ23 570 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 DUS2Q9NX74 493 aaKnown RBP14.21□□□□□ -0.13
VCL-205ENST00000478896 GDAP2Q9NXN4 497 aa14.21□□□□□ -0.13
VCL-205ENST00000478896 ANAPC1Q9H1A4 1944 aa14.21□□□□□ -0.14
VCL-205ENST00000478896 SPAG17Q6Q759 2223 aa14.21□□□□□ -0.14
VCL-205ENST00000478896 EML5Q05BV3 1969 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 HCRTO43612 131 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 TNNC2P02585 160 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 ADRB1P08588 477 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 USP17L7P0C7H9 530 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 DRD1P21728 446 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 GJA4P35212 333 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 CUL4AQ13619 759 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 CFAP221Q4G0U5 840 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 FBXO43Q4G163 708 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 CACNA2D4Q7Z3S7 1137 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 OSTM1Q86WC4 334 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 RPLP0P6Q8NHW5 317 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 ATP2A3Q93084 1043 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 CHFRQ96EP1 664 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 FUBP3Q96I24 572 aaKnown RBP eCLIP14.2□□□□□ -0.14
VCL-205ENST00000478896 HHIPQ96QV1 700 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 ARRDC1-AS1Q9H2J1 176 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 ECT2Q9H8V3 914 aa14.2□□□□□ -0.14
VCL-205ENST00000478896 MYO16Q9Y6X6 1858 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 CCDC163A0A0D9SF12 145 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 FRMD3A2A2Y4 597 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 KIAA0391O15091 583 aaKnown RBP14.19□□□□□ -0.14
VCL-205ENST00000478896 SYT1P21579 422 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 ANXA13P27216 316 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 GALK1P51570 392 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 PSMC1P62191 440 aaKnown RBP14.19□□□□□ -0.14
VCL-205ENST00000478896 USP4Q13107 963 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 ZNF77Q15935 545 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 CCDC6Q16204 474 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 SOWAHAQ2M3V2 549 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 KBTBD6Q86V97 674 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 CAMKK1Q8N5S9 505 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 ARL14EPQ8N8R7 260 aaPredicted RBP14.19□□□□□ -0.14
VCL-205ENST00000478896 DDX1Q92499 740 aaKnown RBP14.19□□□□□ -0.14
VCL-205ENST00000478896 CD101Q93033 1021 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 MYLPFQ96A32 169 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 ACDQ96AP0 544 aa14.19□□□□□ -0.14
VCL-205ENST00000478896 LOXL4Q96JB6 756 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms