RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 DENND4AQ7Z401 1863 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 TPM2P07951 284 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 CDK11BP21127 795 aaKnown RBP28.53■■■□□ 2.16
CCM2-211ENST00000478582 ZXDAP98168 799 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 GCNT1Q02742 428 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 TRIM65Q6PJ69 517 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 LRSAM1Q6UWE0 723 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 C4orf50Q6ZRC1 276 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 WHAMMQ8TF30 809 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 SMG7Q92540 1137 aaKnown RBP28.53■■■□□ 2.16
CCM2-211ENST00000478582 ARID3AQ99856 593 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 CRACR2AQ9BSW2 395 aa28.53■■■□□ 2.16
CCM2-211ENST00000478582 WDR6Q9NNW5 1121 aaKnown RBP28.53■■■□□ 2.16
CCM2-211ENST00000478582 HAPLN1P10915 354 aaPredicted RBP28.52■■■□□ 2.16
CCM2-211ENST00000478582 SLC9A1P19634 815 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 COPB1P53618 953 aaKnown RBP28.52■■■□□ 2.16
CCM2-211ENST00000478582 YWHAEP62258 255 aaKnown RBP28.52■■■□□ 2.16
CCM2-211ENST00000478582 PTPN21Q16825 1174 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 CCDC142Q17RM4 750 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 PHLDB3Q6NSJ2 640 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 OTOP3Q7RTS5 596 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 APTXQ7Z2E3 356 aaKnown RBP28.52■■■□□ 2.16
CCM2-211ENST00000478582 UBR7Q8N806 425 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 ACSF2Q96CM8 615 aaPredicted RBP28.52■■■□□ 2.16
CCM2-211ENST00000478582 NT5C1AQ9BXI3 368 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 VPS16Q9H269 839 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 ABI2Q9NYB9 513 aaPredicted RBP28.52■■■□□ 2.16
CCM2-211ENST00000478582 HMGXB4Q9UGU5 601 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 SLC27A5Q9Y2P5 690 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 YIPF1Q9Y548 306 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 MYO10Q9HD67 2058 aa28.52■■■□□ 2.16
CCM2-211ENST00000478582 XYLBO75191 536 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 LRG1P02750 347 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 CD58P19256 250 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 PON1P27169 355 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 PLD1Q13393 1074 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 MDH1BQ5I0G3 518 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 SPATA2LQ8IUW3 424 aaPredicted RBP28.51■■■□□ 2.15
CCM2-211ENST00000478582 ARHGEF19Q8IW93 802 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 PPM1KQ8N3J5 372 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 TTC9BQ8N6N2 239 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 MYLPFQ96A32 169 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 JAKMIP2Q96AA8 810 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 PCED1BQ96HM7 432 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 TWNKQ96RR1 684 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 DNAI2Q9GZS0 605 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 PIDD1Q9HB75 910 aa28.51■■■□□ 2.15
CCM2-211ENST00000478582 MAGEA11P43364 429 aa28.5■■■□□ 2.15
CCM2-211ENST00000478582 SMYD5Q6GMV2 418 aa28.5■■■□□ 2.15
CCM2-211ENST00000478582 ACOT1Q86TX2 421 aa28.5■■■□□ 2.15
CCM2-211ENST00000478582 FAM200AQ8TCP9 573 aa28.5■■■□□ 2.15
CCM2-211ENST00000478582 FAM81BQ96LP2 452 aa28.5■■■□□ 2.15
CCM2-211ENST00000478582 PES1O00541 588 aaKnown RBP28.49■■■□□ 2.15
CCM2-211ENST00000478582 CCL16O15467 120 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 ATP1A3P13637 1013 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 TRIM21P19474 475 aaKnown RBP28.49■■■□□ 2.15
CCM2-211ENST00000478582 ALDH1A3P47895 512 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 ZNF445P59923 1031 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 KCNMA1Q12791 1236 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 TWF1Q12792 350 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 MGAT5BQ3V5L5 792 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 TRIM67Q6ZTA4 783 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 RRAGAQ7L523 313 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 LUZP1Q86V48 1076 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 LPIN3Q9BQK8 851 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 ELOVL4Q9GZR5 314 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 TSPY26PQ9H489 355 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 LIMD1Q9UGP4 676 aa28.49■■■□□ 2.15
CCM2-211ENST00000478582 CLUHO75153 1309 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 ACO1P21399 889 aaKnown RBP28.48■■■□□ 2.15
CCM2-211ENST00000478582 CYP2F1P24903 491 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 DPY19L2P1Q6NXN4 242 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 VSTM1Q6UX27 236 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 ENOSF1Q7L5Y1 443 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 KAT5Q92993 513 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 TMEM176AQ96HP8 235 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 SEPT5Q99719 369 aaPredicted RBP28.48■■■□□ 2.15
CCM2-211ENST00000478582 B3GNT5Q9BYG0 378 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 SIX2Q9NPC8 291 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 APEX2Q9UBZ4 518 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 ASB3Q9Y575 518 aa28.48■■■□□ 2.15
CCM2-211ENST00000478582 TECTAO75443 2155 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 LGALS16A8MUM7 142 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 CDR1P51861 262 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 RAD23BP54727 409 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 EPHB3P54753 998 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 CYP27A1Q02318 531 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 FKBP15Q5T1M5 1219 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 KREMEN1Q96MU8 473 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 UBE2TQ9NPD8 197 aaPredicted RBP28.47■■■□□ 2.15
CCM2-211ENST00000478582 CEP72Q9P209 647 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 SORCS3Q9UPU3 1222 aa28.47■■■□□ 2.15
CCM2-211ENST00000478582 PTPN2P17706 415 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 MFAP3P55082 362 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 RPL10AP62906 217 aaKnown RBP28.46■■■□□ 2.15
CCM2-211ENST00000478582 TPM4P67936 248 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 SIGLEC14Q08ET2 396 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 ORC1Q13415 861 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 ELMOD1Q8N336 334 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 SLC4A11Q8NBS3 891 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms