RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279		K7EQS6	105 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	CYB561D2	O14569	222 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	OGT	O15294	1046 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	MAP3K13	O43283	966 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	FAM189A1	O60320	539 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	ALDH1A2	O94788	518 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	USP17L7	P0C7H9	530 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	P2RY2	P41231	377 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	DPP6	P42658	865 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	RAD51AP2	Q09MP3	1159 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	CRY1	Q16526	586 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-222	ENST00000478279	SPDYC	Q5MJ68	293 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	KRT79	Q5XKE5	535 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	JADE1	Q6IE81	842 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	SLC23A3	Q6PIS1	610 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	KCNK18	Q7Z418	384 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	CD302	Q8IX05	232 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	DCP1B	Q8IZD4	617 aa	Known RBP	11.43	□□□□□ -0.58
APTX-222	ENST00000478279	CHCHD4	Q8N4Q1	142 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	MDGA1	Q8NFP4	955 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	BICD1	Q96G01	975 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	FOXP1	Q9H334	677 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-222	ENST00000478279	TMEM206	Q9H813	350 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	TMEM74B	Q9NUR3	256 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.43	□□□□□ -0.58
APTX-222	ENST00000478279	GPSM3	Q9Y4H4	160 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	PCDHB5	Q9Y5E4	795 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	WNT6	Q9Y6F9	365 aa		11.43	□□□□□ -0.58
APTX-222	ENST00000478279	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.42	□□□□□ -0.58
APTX-222	ENST00000478279	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279		H0YCG3	227 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TADA3	O75528	432 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	CKM	P06732	381 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	CDC25A	P30304	524 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	PTGER3	P43115	390 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TRAPPC10	P48553	1259 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	LIG4	P49917	911 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	SEC13	P55735	322 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	MRPS21	P82921	87 aa	Known RBP	11.42	□□□□□ -0.58
APTX-222	ENST00000478279	USP4	Q13107	963 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	ZNF423	Q2M1K9	1284 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	WSCD1	Q658N2	575 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	C19orf48	Q6RUI8	117 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TMEM92	Q6UXU6	159 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	ARMCX6	Q7L4S7	300 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	PDZD3	Q86UT5	571 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TTC30A	Q86WT1	665 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	EFCAB13	Q8IY85	973 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TMEFF1	Q8IYR6	380 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	HDDC3	Q8N4P3	179 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	CCDC33	Q8N5R6	958 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TTC16	Q8NEE8	873 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	KCNN1	Q92952	543 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	FAM212A	Q96EL1	285 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	SPACA7	Q96KW9	195 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	FNBP1	Q96RU3	617 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	CYP2S1	Q96SQ9	504 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	CCSER1	Q9C0I3	900 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	LINC00597	Q9H2U6	94 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TRPC7	Q9HCX4	862 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	UXT	Q9UBK9	157 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-222	ENST00000478279	DERA	Q9Y315	318 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	BPTF	Q12830	3046 aa		11.42	□□□□□ -0.58
APTX-222	ENST00000478279	MYO18A	Q92614	2054 aa	Known RBP	11.42	□□□□□ -0.58
APTX-222	ENST00000478279	TCHH	Q07283	1943 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	TRAV19	A0A0A6YYK7	116 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	ANTXRL	A6NF34	631 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PP2D1	A8MPX8	630 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	HNRNPDL	O14979	420 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PRPF40A	O75400	957 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	NOL4	O94818	638 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	NFATC1	O95644	943 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	NFIC	P08651	508 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	HOXD12	P35452	270 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	OPRD1	P41143	372 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	GPR15	P49685	360 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	TAF6	P49848	677 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	ATXN3	P54252	364 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	NCKAP1L	P55160	1127 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	TSPY1	Q01534	308 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	BYSL	Q13895	437 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	HNRNPD	Q14103	355 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	TMEM132D	Q14C87	1099 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	NFE2	Q16621	373 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	STKLD1	Q8NE28	680 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	SH3RF2	Q8TEC5	729 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	WHAMM	Q8TF30	809 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	RLN3	Q8WXF3	142 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	TRMT2B	Q96GJ1	504 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	MYRFL	Q96LU7	910 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	SLC22A12	Q96S37	553 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PYM1	Q9BRP8	204 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PI4K2A	Q9BTU6	479 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	TMLHE	Q9NVH6	421 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	LARS	Q9P2J5	1176 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms