RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 MRFAP1Q9Y605 127 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 TNRQ92752 1358 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 AOX1Q06278 1338 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 SPATA31A3Q5VYP0 1347 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 CENPJQ9HC77 1338 aaPredicted RBP5.56□□□□□ -1.52
LMBR1-216ENST00000477983 MAPK8IP3Q9UPT6 1336 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 SETBP1Q9Y6X0 1596 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 GABRDO14764 452 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 EIF5BO60841 1220 aaKnown RBP5.56□□□□□ -1.52
LMBR1-216ENST00000477983 ABCG1P45844 678 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 NXPH1P58417 271 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 PIGFQ07326 219 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 PPP4R3AQ6IN85 833 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 GADL1Q6ZQY3 521 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 PDPRQ8NCN5 879 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 TMIEQ8NEW7 156 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 MYCBPAPQ8TBZ2 947 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 POC1BQ8TC44 478 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 SNX19Q92543 992 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 KAT5Q92993 513 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 CLPTM1LQ96KA5 538 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 PCDHB1Q9Y5F3 818 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 A2ML1A8K2U0 1454 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 ZFYVE9O95405 1425 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 RIMS2Q9UQ26 1411 aa5.56□□□□□ -1.52
LMBR1-216ENST00000477983 VIRMAQ69YN4 1812 aaKnown RBP5.55□□□□□ -1.52
LMBR1-216ENST00000477983 ADGRB1O14514 1584 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 KATNA1O75449 491 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 PPP3CBP16298 524 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 ITIH3Q06033 890 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 CC2D1BQ5T0F9 858 aaKnown RBP5.55□□□□□ -1.52
LMBR1-216ENST00000477983 TSTD2Q5T7W7 516 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 PDSS2Q86YH6 399 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 NSUN7Q8NE18 718 aaKnown RBP5.55□□□□□ -1.52
LMBR1-216ENST00000477983 TOR1AIP2Q8NFQ8 470 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 HASPINQ8TF76 798 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 DPF1Q92782 380 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 IMPG2Q9BZV3 1241 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 KLC4Q9NSK0 619 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 SERPINB13Q9UIV8 391 aa5.55□□□□□ -1.52
LMBR1-216ENST00000477983 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.55□□□□□ -1.52
LMBR1-216ENST00000477983 CGNL1Q0VF96 1302 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 KDM5AP29375 1690 aaKnown RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 VWC2LB2RUY7 222 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 E9PLN8 166 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 GCOM1H8Y6P7 765 aaPredicted RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 PTMSP20962 102 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 MC2RQ01718 297 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 GLIPR1L2Q4G1C9 344 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 PNMA8AQ86V59 439 aaPredicted RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 AOPEPQ8N6M6 819 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 PRPF38AQ8NAV1 312 aaKnown RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 SLC17A8Q8NDX2 589 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 NSUN6Q8TEA1 469 aaKnown RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 SCARB1Q8WTV0 552 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 VKORC1Q9BQB6 163 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 SIDT1Q9NXL6 827 aaKnown RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 ADAM21Q9UKJ8 722 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 CFAP20Q9Y6A4 193 aaKnown RBP5.54□□□□□ -1.52
LMBR1-216ENST00000477983 FER1L4A9Z1Z3 1794 aa5.54□□□□□ -1.52
LMBR1-216ENST00000477983 QRICH2Q9H0J4 1663 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 MYO3AQ8NEV4 1616 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 ALKQ9UM73 1620 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 LINC00473A8K010 186 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 TOR1BO14657 336 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 PRKCGP05129 697 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 RPLP2P05387 115 aaKnown RBP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 CHRM2P08172 466 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 CELA2AP08217 269 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 LPOP22079 712 aaPredicted RBP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 ADKP55263 362 aaKnown RBP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 WDR43Q15061 677 aaKnown RBP eCLIP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 UAP1L1Q3KQV9 507 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 PREPLQ4J6C6 727 aaPredicted RBP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 FCRLBQ6BAA4 426 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 UBE2Q2Q8WVN8 375 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 SMG7Q92540 1137 aaKnown RBP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 GPATCH3Q96I76 525 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 TRIB1Q96RU8 372 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 OSBPL9Q96SU4 736 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 UPF2Q9HAU5 1272 aaKnown RBP5.53□□□□□ -1.52
LMBR1-216ENST00000477983 KNSTRNQ9Y448 316 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 WNT6Q9Y6F9 365 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 KAT6AQ92794 2004 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 C3P01024 1663 aa5.53□□□□□ -1.52
LMBR1-216ENST00000477983 EVC2Q86UK5 1308 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 ZNF521Q96K83 1311 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 ADGRA2Q96PE1 1338 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 ARHGEF28Q8N1W1 1705 aaKnown RBP5.52□□□□□ -1.53
LMBR1-216ENST00000477983 YTHDC2Q9H6S0 1430 aaKnown RBP5.52□□□□□ -1.53
LMBR1-216ENST00000477983 ALG1L2C9J202 215 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 CT47B1P0C2W7 299 aaPredicted RBP5.52□□□□□ -1.53
LMBR1-216ENST00000477983 CYP2C19P33261 490 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 NPTX2P47972 431 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 EVA1CP58658 441 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 PTPN21Q16825 1174 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 TAPT1Q6NXT6 567 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 TTC7BQ86TV6 843 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms