RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ZSCAN18Q8TBC5 510 aaPredicted RBP18.86■□□□□ 0.61
PTPN7-209ENST00000477554 PCED1BQ96HM7 432 aa18.86■□□□□ 0.61
PTPN7-209ENST00000477554 ANO10Q9NW15 660 aa18.86■□□□□ 0.61
PTPN7-209ENST00000477554 GDE1Q9NZC3 331 aa18.86■□□□□ 0.61
PTPN7-209ENST00000477554 R3HCC1Q9Y3T6 440 aaKnown RBP18.86■□□□□ 0.61
PTPN7-209ENST00000477554 ZFP37Q9Y6Q3 630 aaPredicted RBP18.86■□□□□ 0.61
PTPN7-209ENST00000477554 TACC1O75410 805 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 BDNFP23560 247 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 TUFMP49411 452 aaKnown RBP18.85■□□□□ 0.61
PTPN7-209ENST00000477554 TYRO3Q06418 890 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 STX1AQ16623 288 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 EDRF1Q3B7T1 1238 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 KLHL10Q6JEL2 608 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 VITQ6UXI7 678 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 PRSS33Q8NF86 280 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 FLCNQ8NFG4 579 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 DUSP9Q99956 384 aaKnown RBP18.85■□□□□ 0.61
PTPN7-209ENST00000477554 ATXN3LQ9H3M9 355 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 VRTNQ9H8Y1 702 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 HSFX1Q9UBD0 423 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 FBXL21Q9UKT6 434 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 CDH9Q9ULB4 789 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 MAGED2Q9UNF1 606 aaPredicted RBP18.85■□□□□ 0.61
PTPN7-209ENST00000477554 MUC6Q6W4X9 2439 aa18.85■□□□□ 0.61
PTPN7-209ENST00000477554 SHISA7A6NL88 538 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 ZNF197O14709 1029 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 MAPK13O15264 365 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 CLSTN1O94985 981 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 KIF20AO95235 890 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 PRAMEF12O95522 483 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 PCSK1P29120 753 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 PSMC2P35998 433 aaKnown RBP18.84■□□□□ 0.61
PTPN7-209ENST00000477554 ASPAP45381 313 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 USP46P62068 366 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 CYP27A1Q02318 531 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 SPATA2LQ8IUW3 424 aaPredicted RBP18.84■□□□□ 0.61
PTPN7-209ENST00000477554 SCN4BQ8IWT1 228 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 RIN3Q8TB24 985 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 C2orf15Q8WU43 125 aaKnown RBP18.84■□□□□ 0.61
PTPN7-209ENST00000477554 TWNKQ96RR1 684 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 B3GNT5Q9BYG0 378 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 ZNF518BQ9C0D4 1074 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 SNX25Q9H3E2 840 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 DACH1Q9UI36 760 aa18.84■□□□□ 0.61
PTPN7-209ENST00000477554 MICAL2O94851 1124 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 ASS1P00966 412 aaKnown RBP18.83■□□□□ 0.61
PTPN7-209ENST00000477554 F11P03951 625 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 PTPN1P18031 435 aaKnown RBP18.83■□□□□ 0.61
PTPN7-209ENST00000477554 AVPR2P30518 371 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 ATICP31939 592 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 PPP1R2P41236 205 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 PIK3CAP42336 1068 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 NFE2Q16621 373 aaPredicted RBP18.83■□□□□ 0.61
PTPN7-209ENST00000477554 CBWD6Q4V339 395 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 ZNF667Q5HYK9 610 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 CBWD3Q5JTY5 395 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 CBWD5Q5RIA9 395 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 GPR158Q5T848 1215 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 PAQR9Q6ZVX9 377 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 MTSS1LQ765P7 747 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 MLKLQ8NB16 471 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 MYCBPAPQ8TBZ2 947 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 SPATA18Q8TC71 538 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 NXPE3Q969Y0 559 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 FUCA2Q9BTY2 467 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 SLITRK6Q9H5Y7 841 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 TICRRQ7Z2Z1 1910 aa18.83■□□□□ 0.61
PTPN7-209ENST00000477554 NUP210Q8TEM1 1887 aaPredicted RBP18.83■□□□□ 0.61
PTPN7-209ENST00000477554 VPS13AQ96RL7 3174 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 ANAPC1Q9H1A4 1944 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 A8MXQ7 604 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 IKBKBO14920 756 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 ECI2O75521 394 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 CD72P21854 359 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 STX17P56962 302 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 MCCD1P59942 119 aaPredicted RBP18.83■□□□□ 0.6
PTPN7-209ENST00000477554 STIM1Q13586 685 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 CFAP221Q4G0U5 840 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 INTS8Q75QN2 995 aaKnown RBP18.83■□□□□ 0.6
PTPN7-209ENST00000477554 SMARCD2Q92925 531 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 MED15Q96RN5 788 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 SLC46A2Q9BY10 475 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 FOXQ1Q9C009 403 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 SLC2A4RGQ9NR83 387 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 CTNND2Q9UQB3 1225 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 MTF2Q9Y483 593 aaPredicted RBP18.83■□□□□ 0.6
PTPN7-209ENST00000477554 ASB3Q9Y575 518 aa18.83■□□□□ 0.6
PTPN7-209ENST00000477554 CAVIN2O95810 425 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 CCNE1P24864 410 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 RPL13P26373 211 aaKnown RBP18.82■□□□□ 0.6
PTPN7-209ENST00000477554 AP3M2P53677 418 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 SMARCB1Q12824 385 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 CT47A1Q5JQC4 288 aaPredicted RBP18.82■□□□□ 0.6
PTPN7-209ENST00000477554 TXNDC8Q6A555 127 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 TTI2Q6NXR4 508 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ACOT1Q86TX2 421 aa18.82■□□□□ 0.6
PTPN7-209ENST00000477554 ARID3BQ8IVW6 561 aaPredicted RBP18.82■□□□□ 0.6
PTPN7-209ENST00000477554 SUGP1Q8IWZ8 645 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms