RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FIGNQ5HY92 759 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 RNF19BQ6ZMZ0 732 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 LRRTM3Q86VH5 581 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 PPFIBP1Q86W92 1011 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 IQCDQ96DY2 449 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 CDCA3Q99618 268 aaPredicted RBP16.29■□□□□ 0.2
SEC13-215ENST00000477547 LPIN3Q9BQK8 851 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 NUP58Q9BVL2 599 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 FBXW11Q9UKB1 542 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 CNTN6Q9UQ52 1028 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
SEC13-215ENST00000477547 TGM5O43548 720 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 GYPCP04921 128 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 PAEPP09466 180 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 CCDC130P13994 396 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 SSTR3P32745 418 aaPredicted RBP16.28■□□□□ 0.2
SEC13-215ENST00000477547 SOX5P35711 763 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 CLCN4P51793 760 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 CYP27A1Q02318 531 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 NHLH1Q02575 133 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 HYAL1Q12794 435 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 TPGS2Q68CL5 300 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 FAM171BQ6P995 826 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 FAM35AQ86V20 835 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 SPATA2LQ8IUW3 424 aaPredicted RBP16.28■□□□□ 0.2
SEC13-215ENST00000477547 CRYBG2Q8N1P7 616 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 MYCBPAPQ8TBZ2 947 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 BAP1Q92560 729 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 MED10Q9BTT4 135 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 UBE2ZQ9H832 354 aaPredicted RBP16.28■□□□□ 0.2
SEC13-215ENST00000477547 AFF4Q9UHB7 1163 aaKnown RBP16.28■□□□□ 0.2
SEC13-215ENST00000477547 PCDHB5Q9Y5E4 795 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.28■□□□□ 0.21e-7■□□□□ 8.8
SEC13-215ENST00000477547 HCFC2Q9Y5Z7 792 aa16.28■□□□□ 0.2
SEC13-215ENST00000477547 A0A1W2PQJ5 194 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
SEC13-215ENST00000477547 FOXN3O00409 490 aaPredicted RBP16.27■□□□□ 0.2
SEC13-215ENST00000477547 CYP26A1O43174 497 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 GFPT2O94808 682 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 ABLIM3O94929 683 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 VNN2O95498 520 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 ADCY5O95622 1261 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 CALCAP01258 141 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 IL9P15248 144 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 EPCAMP16422 314 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 BRD2P25440 801 aaKnown RBP16.27■□□□□ 0.2
SEC13-215ENST00000477547 GNA15P30679 374 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 GTF2F1P35269 517 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEC13-215ENST00000477547 STAT1P42224 750 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 ADCY1Q08828 1119 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 LIN9Q5TKA1 542 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 FAM71AQ8IYT1 594 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 TTC9BQ8N6N2 239 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 C12orf29Q8N999 325 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.27■□□□□ 0.2
SEC13-215ENST00000477547 ZNF461Q8TAF7 563 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 SPPL2BQ8TCT7 592 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.2
SEC13-215ENST00000477547 HEXIM2Q96MH2 286 aaKnown RBP16.27■□□□□ 0.2
SEC13-215ENST00000477547 RHOBTB2Q9BYZ6 727 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 EDEM3Q9BZQ6 932 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 ZNF518BQ9C0D4 1074 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 IGFLR1Q9H665 355 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 MAN1C1Q9NR34 630 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 KRT82Q9NSB4 513 aa16.27■□□□□ 0.2
SEC13-215ENST00000477547 DENND4AQ7Z401 1863 aa16.27■□□□□ 0.19
SEC13-215ENST00000477547 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 LRRC53A6NM62 1247 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 CLDN5O00501 218 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 PRRG1O14668 218 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 THAP12O43422 761 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 TPM1P09493 284 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 SPATA31D3P0C874 917 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 SRGAP2BP0DMP2 458 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ATF2P15336 505 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 KCNA5P22460 613 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ADORA2BP29275 332 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ELF1P32519 619 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 PDE6CP51160 858 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 GOLGA7BQ2TAP0 167 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ELMSAN1Q6PJG2 1045 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 SPATA31D4Q6ZUB0 917 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 FUKQ8N0W3 1084 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ATAD1Q8NBU5 361 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 KREMEN2Q8NCW0 462 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 VN1R2Q8NFZ6 395 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 SLC22A17Q8WUG5 538 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 FUBP3Q96I24 572 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEC13-215ENST00000477547 SEPT5Q99719 369 aaPredicted RBP16.26■□□□□ 0.19
SEC13-215ENST00000477547 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms