RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 DTX3LQ8TDB6 740 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 SPON1Q9HCB6 807 aa11.54□□□□□ -0.56
COL27A1-204ENST00000477421 CICQ96RK0 1608 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-204ENST00000477421 IGF2BP3O00425 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 DDX3YO15523 660 aaKnown RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 UBOX5O94941 541 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 GSTA1P08263 222 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 GSTA2P09210 222 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 NDST1P52848 882 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 ZNF200P98182 395 aaPredicted RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 ASPHQ12797 758 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 DENND1BQ6P3S1 775 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 TTC27Q6P3X3 843 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 NETO2Q8NC67 525 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 DNERQ8NFT8 737 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 EXT2Q93063 718 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 RSAD1Q9HA92 442 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 DMAC2Q9NW81 257 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 NINJ2Q9NZG7 142 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SSX2IPQ9Y2D8 614 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 MYH6P13533 1939 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 LACTBL1A8MY62 500 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 DIAPH2O60879 1101 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 TARSP26639 723 aaKnown RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SPOUT1Q5T280 376 aaKnown RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 METTL23Q86XA0 190 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 ABI1Q8IZP0 508 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 APPL2Q8NEU8 664 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 RNF139Q8WU17 664 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 FAM172AQ8WUF8 416 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 XPNPEP1Q9NQW7 623 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 PDGFCQ9NRA1 345 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 STAP1Q9ULZ2 295 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 TIMM13Q9Y5L4 95 aaPredicted RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 TRIM49D1C9J1S8 452 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 ASAP2O43150 1006 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 ADCYAP1R1P41586 468 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SCTRP47872 440 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SULT1E1P49888 294 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 NCKAP1LP55160 1127 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 C15orf59Q2T9L4 293 aaPredicted RBP11.53□□□□□ -0.56
COL27A1-204ENST00000477421 C9orf131Q5VYM1 1079 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 PPIL6Q8IXY8 311 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 REPS2Q8NFH8 660 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SGSM3Q96HU1 749 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 SHCBP1LQ9BZQ2 653 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 AKAP11Q9UKA4 1901 aa11.53□□□□□ -0.56
COL27A1-204ENST00000477421 IL18RAPO95256 599 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 NFICP08651 508 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 GNL1P36915 607 aaPredicted RBP11.52□□□□□ -0.56
COL27A1-204ENST00000477421 SKOR1P84550 965 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 LAMC2Q13753 1193 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.56
COL27A1-204ENST00000477421 EFHC2Q5JST6 749 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 JADE1Q6IE81 842 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 RNF135Q8IUD6 432 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 NDUFAF2Q8N183 169 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 SAMD3Q8N6K7 520 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 TMEM176AQ96HP8 235 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 SNTG2Q9NY99 539 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 TSPAN16Q9UKR8 245 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 MYH14Q7Z406 1995 aaKnown RBP11.52□□□□□ -0.56
COL27A1-204ENST00000477421 NCANO14594 1321 aa11.52□□□□□ -0.56
COL27A1-204ENST00000477421 BTNL10A8MVZ5 291 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 TRAPPC3O43617 180 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 EDIL3O43854 480 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 PDHA1P08559 390 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ACAT1P24752 427 aaKnown RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 BMPR2Q13873 1038 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 PRPSAP1Q14558 356 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 CYB5D1Q6P9G0 228 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 WDR75Q8IWA0 830 aaKnown RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 APOL2Q9BQE5 337 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 TSSK1BQ9BXA7 367 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 CYP1A2P05177 515 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 NFIL3Q16649 462 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 KIAA0319LQ8IZA0 1049 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 KLRG1Q96E93 195 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 CDCA5Q96FF9 252 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 TTC1Q99614 292 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 NOP53Q9NZM5 478 aaKnown RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ACKR2O00590 384 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 GIPC1O14908 333 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 GPC4O75487 556 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 KCNA2P16389 499 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 MIPP30301 263 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 NOMO3P69849 1222 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms