RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SHCBP1LQ9BZQ2 653 aa19.32■□□□□ 0.68
VARS2-209ENST00000477288 RSAD1Q9HA92 442 aa19.32■□□□□ 0.68
VARS2-209ENST00000477288 M0R3G1 203 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 PRPF18Q99633 342 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 RNF103O00237 685 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 NFIBO00712 420 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 ASS1P00966 412 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 PNPLA4P41247 253 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 PRPF39Q86UA1 669 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 ANKRD49Q8WVL7 239 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 CCDC134Q9H6E4 229 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 UBE2Q2LH0YL09 131 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 NUMBP49757 651 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 MAPRE1Q15691 268 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 OR2W6PQ8NHA6 318 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 PPP1R14AQ96A00 147 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 STMN3Q9NZ72 180 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 FAM47DPA6NHR8 397 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 H7C4K7 107 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 STX7O15400 261 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 FOXP2O15409 715 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 GTF2A2P52657 109 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 POLD3Q15054 466 aaPredicted RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 RIN3Q8TB24 985 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 ZNF473Q8WTR7 871 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 SGF29Q96ES7 293 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 TARS2Q9BW92 718 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 KCNH7Q9NS40 1196 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 SNX12Q9UMY4 172 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 VSNL1P62760 191 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 DDX39BQ13838 428 aaKnown RBP19.31■□□□□ 0.68
VARS2-209ENST00000477288 TRIP10Q15642 601 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 ZNF614Q8N883 585 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 CMTM5Q96DZ9 223 aa19.31■□□□□ 0.68
VARS2-209ENST00000477288 CST8O60676 142 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 EPHB2P29323 1055 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 PTGER2P43116 358 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 SLC44A2Q8IWA5 706 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 RPRD1AQ96P16 312 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 WDCPQ9H6R7 721 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 PMPCBO75439 489 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 PSMA3P25788 255 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 PBLDP30039 288 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 PRIM2P49643 509 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 E4F1Q66K89 784 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 CCDC60Q8IWA6 550 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 MIER2Q8N344 545 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 USP6NLQ92738 828 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 CHP1Q99653 195 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 NMRK2Q9NPI5 230 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 PCDHB2Q9Y5E7 798 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 KLHL2O95198 593 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 NPEPPSP55786 919 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 VN1R5Q7Z5H4 357 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 CARNMT1Q8N4J0 409 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 BLOC1S5Q8TDH9 187 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 ACSF2Q96CM8 615 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 OLFML2BQ68BL8 750 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 TRAF7Q6Q0C0 670 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 TNIP2Q8NFZ5 429 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 ZKSCAN4Q969J2 545 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 WDR24Q96S15 920 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 OSBPL8Q9BZF1 889 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 CEP152O94986 1710 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 LOC100653049A0A140TA62 436 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 DCDC2CA8MYV0 355 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 KRT34O76011 436 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 DPYDQ12882 1025 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 CHI3L2Q15782 390 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 NAPEPLDQ6IQ20 393 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 ADSSL1Q8N142 457 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 FAM71DQ8N9W8 422 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 ZNF669Q96BR6 464 aaPredicted RBP19.3■□□□□ 0.68
VARS2-209ENST00000477288 MPP6Q9NZW5 540 aa19.3■□□□□ 0.68
VARS2-209ENST00000477288 M0QYT0 321 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 GPR182O15218 404 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 RASA1P20936 1047 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 KCNA3P22001 575 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 MROH9Q5TGP6 573 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 DPF2Q92785 391 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 CNDP1Q96KN2 507 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 EPN3Q9H201 632 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 RERGLQ9H628 205 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 JMJD4Q9H9V9 463 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 SMARCAL1Q9NZC9 954 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 SRGNP10124 158 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 COMTP21964 271 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 SEZ6Q53EL9 994 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 TRIM65Q6PJ69 517 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 MICU2Q8IYU8 434 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 KIRREL3Q8IZU9 778 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 DPF3Q92784 378 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 ERP27Q96DN0 273 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 ECSITQ9BQ95 431 aa19.29■□□□□ 0.68
VARS2-209ENST00000477288 USP15Q9Y4E8 981 aaPredicted RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 NCF1BA6NI72 391 aaPredicted RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 NCF1CA8MVU1 366 aaPredicted RBP19.29■□□□□ 0.68
VARS2-209ENST00000477288 NCF1P14598 390 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms