RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ANAPC1Q9H1A4 1944 aa11.31□□□□□ -0.6
CALD1-217ENST00000475772 ZFHX4Q86UP3 3567 aa11.31□□□□□ -0.6
CALD1-217ENST00000475772 A0A0B4J269 797 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 VWA3AA6NCI4 1184 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 OTOL1A6NHN0 477 aaPredicted RBP11.3□□□□□ -0.6
CALD1-217ENST00000475772 ANKRD63C9JTQ0 380 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 SLC30A4O14863 429 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 OGTO15294 1046 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 LRP3O75074 770 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 PRAMEF12O95522 483 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 CYP11A1P05108 521 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 ADRB1P08588 477 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 NFICP08651 508 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 ATF6P18850 670 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.6
CALD1-217ENST00000475772 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 ZNF131P52739 623 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 CYP4F8P98187 520 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 GRIN1Q05586 938 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 PPP2R3AQ06190 1150 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 PLD1Q13393 1074 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 PON2Q15165 354 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 GPR158Q5T848 1215 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 C9orf57Q5W0N0 161 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 USP37Q86T82 979 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 TMEM150AQ86TG1 271 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 LONP2Q86WA8 852 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 RALGPS2Q86X27 583 aaPredicted RBP11.3□□□□□ -0.6
CALD1-217ENST00000475772 MSANTD3Q96H12 275 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 IKZF4Q9H2S9 585 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
CALD1-217ENST00000475772 OBP2AQ9NY56 170 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 LARSQ9P2J5 1176 aaKnown RBP11.3□□□□□ -0.6
CALD1-217ENST00000475772 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 ASB3Q9Y575 518 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 PCDHB11Q9Y5F2 797 aa11.3□□□□□ -0.6
CALD1-217ENST00000475772 MYO16Q9Y6X6 1858 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.29□□□□□ -0.6
CALD1-217ENST00000475772 TISP43B9A030 160 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 NMT1P30419 496 aaKnown RBP11.29□□□□□ -0.6
CALD1-217ENST00000475772 HOXA6P31267 233 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 CNR2P34972 360 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 LIG4P49917 911 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 KPNA1P52294 538 aaPredicted RBP11.29□□□□□ -0.6
CALD1-217ENST00000475772 GTF2BQ00403 316 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 PPP2R5DQ14738 602 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 CSRP2Q16527 193 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 RILPL1Q5EBL4 403 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 HEATR6Q6AI08 1181 aaKnown RBP11.29□□□□□ -0.6
CALD1-217ENST00000475772 ZNF787Q6DD87 383 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 PRR23CQ6ZRP0 262 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 WDR5BQ86VZ2 330 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 YAF2Q8IY57 180 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 LINC00528Q8N1L1 170 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 RIN3Q8TB24 985 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 BICD1Q96G01 975 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 TSPAN18Q96SJ8 248 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 FAM83CQ9BQN1 747 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 SMG9Q9H0W8 520 aaKnown RBP11.29□□□□□ -0.6
CALD1-217ENST00000475772 TASP1Q9H6P5 420 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 RXFP3Q9NSD7 469 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
CALD1-217ENST00000475772 RAB23Q9ULC3 237 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 ODF2LQ9ULJ1 636 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 GON4LQ3T8J9 2241 aa11.29□□□□□ -0.6
CALD1-217ENST00000475772 MYO18AQ92614 2054 aaKnown RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 MYOFQ9NZM1 2061 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 TM4SF5O14894 197 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 EXTL3O43909 919 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 TRAK2O60296 914 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 F11P03951 625 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 HMGA1P17096 107 aaKnown RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 ACOT2P49753 483 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 LRRC32Q14392 662 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 DHX8Q14562 1220 aaKnown RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 KYAT1Q16773 422 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 SLC39A12Q504Y0 691 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 ZC2HC1CQ53FD0 456 aaPredicted RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 ARL6IP4Q66PJ3 421 aaKnown RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 C1orf228Q6PIY5 440 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 CRELD2Q6UXH1 353 aaPredicted RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 CD302Q8IX05 232 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 MYCT1Q8N699 235 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 GIPC2Q8TF65 315 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 FBRSL1Q9HCM7 1045 aaKnown RBP11.28□□□□□ -0.6
CALD1-217ENST00000475772 HPS4Q9NQG7 708 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 GKN1Q9NS71 199 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 TMLHEQ9NVH6 421 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 CCL26Q9Y258 94 aa11.28□□□□□ -0.6
CALD1-217ENST00000475772 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms