RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-229	ENST00000475651	RPS6KA4	O75676	772 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	UFL1	O94874	794 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	RHOBTB3	O94955	611 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	SEC31A	O94979	1220 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.58	□□□□□ -1.68	3e-8	■■□□□ 14
RBM39-229	ENST00000475651	LTF	P02788	710 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	GYPC	P04921	128 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	HLA-DOA	P06340	250 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	CYP2D6	P10635	497 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	IDE	P14735	1019 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	SMARCA1	P28370	1054 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	CASP1	P29466	404 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	MSX2	P35548	267 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	TEC	P42680	631 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	KCNQ1	P51787	676 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	EPHA5	P54756	1037 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	HDLBP	Q00341	1268 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	DBP	Q10586	325 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	IFRD2	Q12894	506 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	TOP3A	Q13472	1001 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	ITPK1	Q13572	414 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	GRM7	Q14831	915 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	MTF1	Q14872	753 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	SEPT2	Q15019	361 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	SLC4A8	Q2Y0W8	1093 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	TUBB8	Q3ZCM7	444 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	ASPRV1	Q53RT3	343 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	TBC1D9B	Q66K14	1250 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	MAMDC4	Q6UXC1	1216 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	RAD9B	Q6WBX8	426 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	RSRC2	Q7L4I2	434 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	ADGRA1	Q86SQ6	560 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	VPS36	Q86VN1	386 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	MAPKAPK5	Q8IW41	473 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	CCDC65	Q8IXS2	484 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	RBM12B	Q8IXT5	1001 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	ACRBP	Q8NEB7	543 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	TRIM58	Q8NG06	486 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	NEK11	Q8NG66	645 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	GOLGA5	Q8TBA6	731 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	RUBCN	Q92622	972 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	TAF4B	Q92750	862 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	CELF1	Q92879	486 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	C1orf159	Q96HA4	380 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	CNOT6L	Q96LI5	555 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	C7orf25	Q9BPX7	421 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.58	□□□□□ -1.68	2e-25	■■■□□ 15.6
RBM39-229	ENST00000475651	SPZ1	Q9BXG8	430 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	NT5C3A	Q9H0P0	336 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	MMRN2	Q9H8L6	949 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	MRPL44	Q9H9J2	332 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	RIC8A	Q9NPQ8	531 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	ZNF446	Q9NWS9	450 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	SAP30BP	Q9UHR5	308 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	CCNL1	Q9UK58	526 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	FAM184B	Q9ULE4	1060 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	PCDHA6	Q9UN73	950 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	GDA	Q9Y2T3	454 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	PCDHA8	Q9Y5H6	950 aa		4.58	□□□□□ -1.68
RBM39-229	ENST00000475651	DISP2	A7MBM2	1401 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	SPATA31A5	Q5VU36	1347 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	SPATA31A7	Q8IWB4	1347 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651		A0A087X0B3	334 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	TTC26	A0AVF1	554 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	TARSL2	A2RTX5	802 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	GOLGA6L10	A6NI86	522 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	CAPN14	A8MX76	684 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	EIF3CL	B5ME19	914 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	PSMD14	O00487	310 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	MPHOSPH10	O00566	681 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	SLC26A4	O43511	780 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	HSF2BP	O75031	334 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	BBOX1	O75936	387 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	ERLIN2	O94905	339 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	PEX11B	O96011	259 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	C1S	P09871	688 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	SRGN	P10124	158 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	GCFC2	P16383	781 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	CAPN2	P17655	700 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	TCP1	P17987	556 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	PRDX5	P30044	214 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	CYP2C19	P33261	490 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	PBX1	P40424	430 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	BTD	P43251	543 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	MAGEA1	P43355	309 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	FXR1	P51114	621 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	CDK17	Q00537	523 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	LRRC63	Q05C16	580 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	TRAF1	Q13077	416 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	IK	Q13123	557 aa	Predicted RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	NFYC	Q13952	458 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	PDIA5	Q14554	519 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	MAN2A1	Q16706	1144 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	SLC9C1	Q4G0N8	1177 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	EARS2	Q5JPH6	523 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	SFMBT2	Q5VUG0	894 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	DENND5A	Q6IQ26	1287 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	DPY19L2P1	Q6NXN4	242 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	FMNL3	Q8IVF7	1028 aa		4.57	□□□□□ -1.68
RBM39-229	ENST00000475651	MYOCD	Q8IZQ8	938 aa		4.57	□□□□□ -1.68

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