RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ZNF571Q7Z3V5 609 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 TMC7Q7Z402 723 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 TMEM139Q8IV31 216 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 EPS8L1Q8TE68 723 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 TNIP3Q96KP6 325 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 KLHL5Q96PQ7 755 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 PCDHB18PQ96TA0 734 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 HNRNPABQ99729 332 aaKnown RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 AGPAT1Q99943 283 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 TCF25Q9BQ70 676 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 OXCT2Q9BYC2 517 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 HAUS4Q9H6D7 363 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 MRPL17Q9NRX2 175 aaKnown RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 ARHGAP20Q9P2F6 1191 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 PCDHGC5Q9Y5F6 944 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 IRAK3Q9Y616 596 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 O00370 1275 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CLDN5O00501 218 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 SOX1O00570 391 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 TEX28O15482 410 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 ABLIM3O94929 683 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 MMEP08473 750 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CNPP09543 421 aaKnown RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CCDC172P0C7W6 258 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CCDC130P13994 396 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CD19P15391 556 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 SSTR3P32745 418 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 OR1D2P34982 312 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CDR1P51861 262 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 TSPY1Q01534 308 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 FMO1Q01740 532 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CDR2Q01850 454 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 KLHL30Q0D2K2 578 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 GPR17Q13304 367 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 RAB33AQ14088 237 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 TAF3Q5VWG9 929 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 DENND1BQ6P3S1 775 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 LILRA6Q6PI73 481 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 FMNL3Q8IVF7 1028 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 DCP1BQ8IZD4 617 aaKnown RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 FUKQ8N0W3 1084 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 WDTC1Q8N5D0 677 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 SLC30A5Q8TAD4 765 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 SLC2A14Q8TDB8 520 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CYFIP2Q96F07 1278 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 PCED1BQ96HM7 432 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF576Q9H609 170 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 NGRNQ9NPE2 291 aaKnown RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 TLR9Q9NR96 1032 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 FAM49BQ9NUQ9 324 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 SSX2IPQ9Y2D8 614 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 BZW2Q9Y6E2 419 aaKnown RBP10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CDY1Q9Y6F8 540 aa10.63□□□□□ -0.71
COL8A1-206ENST00000474648 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 LAMA3Q16787 3333 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 WDR27A2RRH5 827 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 DDX3XO00571 662 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 THAP12O43422 761 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 MICAL2O94851 1124 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 EIF4A3P38919 411 aaKnown RBP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ARPP19P56211 112 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ROR1Q01973 937 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 SMC1AQ14683 1233 aaKnown RBP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 SLC39A12Q504Y0 691 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 SGO2Q562F6 1265 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 PLPP4Q5VZY2 271 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 PDE12Q6L8Q7 609 aaKnown RBP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 RNF19BQ6ZMZ0 732 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 TTC30AQ86WT1 665 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF677Q86XU0 584 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 LRRC8AQ8IWT6 810 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ATAD1Q8NBU5 361 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 GDPD5Q8WTR4 605 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 MYLPFQ96A32 169 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF518BQ9C0D4 1074 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 LMAN2LQ9H0V9 348 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 CRISPLD1Q9H336 500 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 NHEJ1Q9H9Q4 299 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ENTPD7Q9NQZ7 604 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 TMEM30AQ9NV96 361 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ZNHIT6Q9NWK9 470 aaKnown RBP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 TSPAN16Q9UKR8 245 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 PCDHGC3Q9UN70 934 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL8A1-206ENST00000474648 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
COL8A1-206ENST00000474648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 SSU72P8A0A1W2PR75 194 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 MTMR11A4FU01 709 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 GOLGA6L6A8MZA4 724 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 MED7O43513 233 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 BEST1O76090 585 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 SEC24AO95486 1093 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 CYP1A1P04798 512 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 TNFAIP3P21580 790 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 CYP2F1P24903 491 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms