RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 TAS1R2Q8TE23 839 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 FGF14Q92915 247 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 TNIP3Q96KP6 325 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 PKMYT1Q99640 499 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 CLSTN2Q9H4D0 955 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 ZFP14Q9HCL3 533 aa15.17■□□□□ 0.02
VAMP4-203ENST00000474047 NARSO43776 548 aaKnown RBP15.16■□□□□ 0.02
VAMP4-203ENST00000474047 SRFP11831 508 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 RFX1P22670 979 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 BDNFP23560 247 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 CDC25CP30307 473 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 GPR15P49685 360 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
VAMP4-203ENST00000474047 CCDC142Q17RM4 750 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 SDHAF4Q5VUM1 108 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 HFE2Q6ZVN8 426 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 B3GALNT2Q8NCR0 500 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 FBXL13Q8NEE6 735 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 SHKBP1Q8TBC3 707 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 NUP62CLQ9H1M0 184 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 DPEP3Q9H4B8 488 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 ZNF334Q9HCZ1 680 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-203ENST00000474047 ATP8B3O60423 1300 aa15.16■□□□□ 0.02
VAMP4-203ENST00000474047 STK25O00506 426 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 CFHP08603 1231 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 MAGEA11P43364 429 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 FAM78AQ5JUQ0 283 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 GPR158Q5T848 1215 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 VSTM1Q6UX27 236 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 FRMD5Q7Z6J6 570 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 TMC8Q8IU68 726 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 CREBRFQ8IUR6 639 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 ZC3H3Q8IXZ2 948 aaKnown RBP15.15■□□□□ 0.02
VAMP4-203ENST00000474047 PCED1BQ96HM7 432 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 DUSP9Q99956 384 aaKnown RBP15.15■□□□□ 0.02
VAMP4-203ENST00000474047 RPP25Q9BUL9 199 aaKnown RBP15.15■□□□□ 0.02
VAMP4-203ENST00000474047 LRRC3Q9BY71 257 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 LMBRD1Q9NUN5 540 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 RAB20Q9NX57 234 aa15.15■□□□□ 0.02
VAMP4-203ENST00000474047 UXTQ9UBK9 157 aaPredicted RBP15.15■□□□□ 0.02
VAMP4-203ENST00000474047 SLC38A8A6NNN8 435 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 TTI2Q6NXR4 508 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 BMP8AQ7Z5Y6 402 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ZSCAN18Q8TBC5 510 aaPredicted RBP15.14■□□□□ 0.01
VAMP4-203ENST00000474047 SMARCD2Q92925 531 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ZSWIM3Q96MP5 696 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
VAMP4-203ENST00000474047 NIF3L1Q9GZT8 377 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 DPYSL4O14531 572 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 TRIM66O15016 1216 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 MOSPD3O75425 235 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ECI2O75521 394 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 GNA14O95837 355 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 COL9A1P20849 921 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 NDST1P52848 882 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 CETN1Q12798 172 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 TPD52L1Q16890 204 aaPredicted RBP15.14■□□□□ 0.01
VAMP4-203ENST00000474047 TANGO2Q6ICL3 276 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 FOXR2Q6PJQ5 311 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 GAREM2Q75VX8 874 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ACOT1Q86TX2 421 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 UNC93AQ86WB7 457 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 MLKLQ8NB16 471 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 STKLD1Q8NE28 680 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ELSPBP1Q96BH3 223 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ASIC4Q96FT7 647 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ASB16Q96NS5 453 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 ELOVL4Q9GZR5 314 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 CYP3A43Q9HB55 503 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 HCN4Q9Y3Q4 1203 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 NME7Q9Y5B8 376 aa15.14■□□□□ 0.01
VAMP4-203ENST00000474047 TECTAO75443 2155 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 CCDC192P0DO97 292 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 CD58P19256 250 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 ASPAP45381 313 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 GPC5P78333 572 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 CYP4F8P98187 520 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 YAF2Q8IY57 180 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 SIX5Q8N196 739 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 FBXL6Q8N531 539 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 MRPS31Q92665 395 aaKnown RBP15.13■□□□□ 0.01
VAMP4-203ENST00000474047 SEMA4DQ92854 862 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 E2F7Q96AV8 911 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 BCO2Q9BYV7 579 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 EHD2Q9NZN4 543 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 WNT16Q9UBV4 365 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 RWDD2AQ9UIY3 292 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 CA14Q9ULX7 337 aa15.13■□□□□ 0.01
VAMP4-203ENST00000474047 CLDN5O00501 218 aa15.12■□□□□ 0.01
VAMP4-203ENST00000474047 HMGA1P17096 107 aaKnown RBP15.12■□□□□ 0.01
VAMP4-203ENST00000474047 NLRP12P59046 1061 aa15.12■□□□□ 0.01
VAMP4-203ENST00000474047 MCCD1P59942 119 aaPredicted RBP15.12■□□□□ 0.01
VAMP4-203ENST00000474047 PFKPQ01813 784 aa15.12■□□□□ 0.01
VAMP4-203ENST00000474047 ORC1Q13415 861 aa15.12■□□□□ 0.01
VAMP4-203ENST00000474047 CBWD6Q4V339 395 aa15.12■□□□□ 0.01
VAMP4-203ENST00000474047 CBWD3Q5JTY5 395 aa15.12■□□□□ 0.01
VAMP4-203ENST00000474047 CBWD5Q5RIA9 395 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms