RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 NETO1Q8TDF5 533 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 MRPS31Q92665 395 aaKnown RBP12.91□□□□□ -0.34
COL16A1-210ENST00000474000 HPS3Q969F9 1004 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 BACH2Q9BYV9 841 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 MTMR12Q9C0I1 747 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 EBF3Q9H4W6 596 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 HPS4Q9NQG7 708 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 SEMA4GQ9NTN9 838 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
COL16A1-210ENST00000474000 COL4A2P08572 1712 aa12.91□□□□□ -0.34
COL16A1-210ENST00000474000 ZNF233A6NK53 670 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 STX6O43752 255 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 NOL4O94818 638 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 TMEM191BP0C7N4 346 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 STK38Q15208 465 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 TMEM196Q5HYL7 178 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 LMBRD2Q68DH5 695 aaPredicted RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 CC2D1AQ6P1N0 951 aaPredicted RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 DPH6Q7L8W6 267 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 LINC00301Q8NCQ3 95 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 OR5B17Q8NGF7 314 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 RIN3Q8TB24 985 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 SPATA18Q8TC71 538 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 MYRFLQ96LU7 910 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 CYP2S1Q96SQ9 504 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 KIF9Q9HAQ2 790 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 INTS13Q9NVM9 706 aa12.9□□□□□ -0.34
COL16A1-210ENST00000474000 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 UXTQ9UBK9 157 aaPredicted RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
COL16A1-210ENST00000474000 TICRRQ7Z2Z1 1910 aa12.9□□□□□ -0.35
COL16A1-210ENST00000474000 ACACBO00763 2458 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 TRDMT1O14717 391 aaKnown RBP12.89□□□□□ -0.35
COL16A1-210ENST00000474000 LRP3O75074 770 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 ATP2C2O75185 946 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 ARSAP15289 507 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 LMO2P25791 158 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 PCSK1P29120 753 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 HOXD13P35453 343 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 GALK1P51570 392 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 AMPD2Q01433 879 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 ZNF268Q14587 947 aaPredicted RBP12.89□□□□□ -0.35
COL16A1-210ENST00000474000 E2F4Q16254 413 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 CSRP2Q16527 193 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 ST3GAL2Q16842 350 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 CCDC142Q17RM4 750 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 FSTL4Q6MZW2 842 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 STXBP4Q6ZWJ1 553 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 CBWD2Q8IUF1 395 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 CHFRQ96EP1 664 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 TRMT2BQ96GJ1 504 aaKnown RBP12.89□□□□□ -0.35
COL16A1-210ENST00000474000 FUBP3Q96I24 572 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL16A1-210ENST00000474000 ANKRD36BP1Q96IX9 119 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 FBRSL1Q9HCM7 1045 aaKnown RBP12.89□□□□□ -0.35
COL16A1-210ENST00000474000 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 HSPBP1Q9NZL4 362 aa12.89□□□□□ -0.35
COL16A1-210ENST00000474000 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 SPTLC2O15270 562 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 ATG13O75143 517 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 PPP6R2O75170 966 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 TADA3O75528 432 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 TNNC2P02585 160 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 AMPD3Q01432 767 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 PDGFRLQ15198 375 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 SURF1Q15526 300 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 CEP68Q76N32 757 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.88□□□□□ -0.35
COL16A1-210ENST00000474000 WDR5BQ86VZ2 330 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 SCN4BQ8IWT1 228 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 TTC16Q8NEE8 873 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 ZNF507Q8TCN5 953 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 KBTBD7Q8WVZ9 684 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 CHAMP1Q96JM3 812 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 SLC22A12Q96S37 553 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 CUEDC2Q9H467 287 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 KIAA1586Q9HCI6 787 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
COL16A1-210ENST00000474000 MAGEC2Q9UBF1 373 aaPredicted RBP12.88□□□□□ -0.35
COL16A1-210ENST00000474000 PDCD11Q14690 1871 aaKnown RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 TRAV19A0A0A6YYK7 116 aa12.87□□□□□ -0.35
COL16A1-210ENST00000474000 K7ELQ4 463 aaPredicted RBP12.87□□□□□ -0.35
COL16A1-210ENST00000474000 CST3P01034 146 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms