RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 KLHL40Q2TBA0 621 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 SKOR2Q2VWA4 1001 aaPredicted RBP14.64□□□□□ -0.07
USF1-205ENST00000473969 ARHGAP15Q53QZ3 475 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 ACOT1Q86TX2 421 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 HS6ST3Q8IZP7 471 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 ITFG1Q8TB96 612 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 ENOX1Q8TC92 643 aaKnown RBP14.64□□□□□ -0.07
USF1-205ENST00000473969 MYADMQ96S97 322 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 LPIN3Q9BQK8 851 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 ELOVL4Q9GZR5 314 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 SDCBP2Q9H190 292 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 DPEP3Q9H4B8 488 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 CD320Q9NPF0 282 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 EHD2Q9NZN4 543 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 TMEM63CQ9P1W3 806 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 UXTQ9UBK9 157 aaPredicted RBP14.64□□□□□ -0.07
USF1-205ENST00000473969 MAGED2Q9UNF1 606 aaPredicted RBP14.64□□□□□ -0.07
USF1-205ENST00000473969 NFE2L3Q9Y4A8 694 aa14.64□□□□□ -0.07
USF1-205ENST00000473969 XIRP2A4UGR9 3374 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 LRRN2O75325 713 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 MICAL2O94851 1124 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 LAMP2P13473 410 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 CDC25CP30307 473 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 TYRO3Q06418 890 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 INCA1Q0VD86 236 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 CUL2Q13617 745 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 MTSS1LQ765P7 747 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 CRYBG2Q8N1P7 616 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 EHBP1Q8NDI1 1231 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 ANKRD20A12PQ8NF67 263 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 GPR152Q8TDT2 470 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 ING5Q8WYH8 240 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 FGF13Q92913 245 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 TATDN2Q93075 761 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 NXPE3Q969Y0 559 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 MCRS1Q96EZ8 462 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 MED15Q96RN5 788 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 GPR88Q9GZN0 384 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 DNAJC25Q9H1X3 360 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 ATXN3LQ9H3M9 355 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 SLITRK6Q9H5Y7 841 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 CISHQ9NSE2 258 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 GDE1Q9NZC3 331 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 IGSF9Q9P2J2 1179 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 EPS15L1Q9UBC2 864 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 TSC2P49815 1807 aa14.63□□□□□ -0.07
USF1-205ENST00000473969 KCNJ18B7U540 433 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 DCXO43602 365 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 CILPO75339 1184 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 ATF6P18850 670 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 GABRR2P28476 465 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 EPHA5P54756 1037 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 KCNJ12Q14500 433 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 MAN2A1Q16706 1144 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 ZNF394Q53GI3 561 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 HSP90AA4PQ58FG1 418 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 SDHAF4Q5VUM1 108 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 GBP6Q6ZN66 633 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 PPM1KQ8N3J5 372 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 CEP295NLQ96MC4 621 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
USF1-205ENST00000473969 TUBGCP2Q9BSJ2 902 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 B3GNT5Q9BYG0 378 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 GCNT4Q9P109 453 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 MUTYHQ9UIF7 546 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 NME7Q9Y5B8 376 aa14.62□□□□□ -0.07
USF1-205ENST00000473969 A0A1W2PRU2 124 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 SLC38A8A6NNN8 435 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 CLDN5O00501 218 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 CEBPBP17676 345 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 CDK11BP21127 795 aaKnown RBP14.61□□□□□ -0.07
USF1-205ENST00000473969 EEF1GP26641 437 aaKnown RBP14.61□□□□□ -0.07
USF1-205ENST00000473969 GPR15P49685 360 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 MYL5Q02045 173 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 ORC1Q13415 861 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 MTMR3Q13615 1198 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 PTPN21Q16825 1174 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 CCDC142Q17RM4 750 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 SLC5A9Q2M3M2 681 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 IRF2BP1Q8IU81 584 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 NPAS3Q8IXF0 933 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 TCEAL4Q96EI5 215 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 CYFIP2Q96F07 1278 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 SMARCD1Q96GM5 515 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 TMEM176AQ96HP8 235 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 SPATA17Q96L03 361 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 C8orf48Q96LL4 319 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 FAM81BQ96LP2 452 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 ZNF518BQ9C0D4 1074 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 INTS2Q9H0H0 1204 aaKnown RBP14.61□□□□□ -0.07
USF1-205ENST00000473969 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
USF1-205ENST00000473969 FAM49BQ9NUQ9 324 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 SORCS3Q9UPU3 1222 aa14.61□□□□□ -0.07
USF1-205ENST00000473969 F8VP50 259 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 AP1G2O75843 785 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 ASGR2P07307 311 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 SLC8A3P57103 927 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 TEAD2Q15562 447 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 EXOC3L4Q17RC7 722 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms