RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.73□□□□□ -1.97
CCDC39-203ENST00000473854 PMFBP1Q8TBY8 1022 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 TGFBRAP1Q8WUH2 860 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 LMBR1Q8WVP7 490 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 MRFAP1L1Q96HT8 127 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 ZFYVE19Q96K21 471 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 MACROD1Q9BQ69 325 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 TINAGL1Q9GZM7 467 aaPredicted RBP2.73□□□□□ -1.97
CCDC39-203ENST00000473854 IFT22Q9H7X7 185 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 MLXIPQ9HAP2 919 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 MAN1C1Q9NR34 630 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 GNL3LQ9NVN8 582 aaKnown RBP2.73□□□□□ -1.97
CCDC39-203ENST00000473854 CDK11AQ9UQ88 783 aaPredicted RBP2.73□□□□□ -1.97
CCDC39-203ENST00000473854 PLAAQ9Y263 795 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 CD2APQ9Y5K6 639 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 RAD54BQ9Y620 910 aa2.73□□□□□ -1.97
CCDC39-203ENST00000473854 E9PLN8 166 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 LINC01565O15544 149 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 SGTAO43765 313 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 EXOC3O60645 756 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 GNAI3P08754 354 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 LPOP22079 712 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-203ENST00000473854 HOXD9P28356 352 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-203ENST00000473854 WASP42768 502 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 GNAI1P63096 354 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 FLYWCH1Q4VC44 716 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 TMEM63BQ5T3F8 832 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 GADL1Q6ZQY3 521 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 PELI3Q8N2H9 469 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 OR2I1PQ8NGU4 316 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-203ENST00000473854 OSR1Q8TAX0 266 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-203ENST00000473854 IFI44Q8TCB0 444 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 ADAMTS18Q8TE60 1221 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 TTC1Q99614 292 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 VKORC1Q9BQB6 163 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 EFHD1Q9BUP0 239 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 MRPL44Q9H9J2 332 aaKnown RBP2.72□□□□□ -1.97
CCDC39-203ENST00000473854 SERHLQ9NQF3 203 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 DNAJC28Q9NX36 388 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 CFAP97Q9P2B7 532 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 HEY2Q9UBP5 337 aa2.72□□□□□ -1.97
CCDC39-203ENST00000473854 CCNL1Q9UK58 526 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-203ENST00000473854 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 FOXN3O00409 490 aaPredicted RBP2.71□□□□□ -1.98
CCDC39-203ENST00000473854 LIPAP38571 399 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 KCNJ4P48050 445 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 CLCN2P51788 898 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 RPS13P62277 151 aaKnown RBP2.71□□□□□ -1.98
CCDC39-203ENST00000473854 SRSF2Q01130 221 aaKnown RBP2.71□□□□□ -1.98
CCDC39-203ENST00000473854 FAM187BQ17R55 369 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 VPS53Q5VIR6 699 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 C16orf86Q6ZW13 317 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 Q6ZWC4 215 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 TMPRSS12Q86WS5 348 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF398Q8TD17 642 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 MFSD3Q96ES6 412 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 SMOC2Q9H3U7 446 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 BRD9Q9H8M2 597 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 GLOD4Q9HC38 313 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 SIDT1Q9NXL6 827 aaKnown RBP2.71□□□□□ -1.98
CCDC39-203ENST00000473854 CALCOCO1Q9P1Z2 691 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 SLC45A2Q9UMX9 530 aa2.71□□□□□ -1.98
CCDC39-203ENST00000473854 TNFRSF13BO14836 293 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 PRKCBP05771 671 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 NGFRP08138 427 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 PHKG2P15735 406 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 CYP2C19P33261 490 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 GCLCP48506 637 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 MTNR1BP49286 362 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 RENBPP51606 427 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 TARDBPQ13148 414 aaKnown RBP eCLIP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 HABP2Q14520 560 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 KRT71Q3SY84 523 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 OTUD3Q5T2D3 398 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 MMP21Q8N119 569 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF548Q8NEK5 533 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 LEO1Q8WVC0 666 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 DDX17Q92841 729 aaKnown RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 C8orf37Q96NL8 207 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 THAP7Q9BT49 309 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-203ENST00000473854 CIPCQ9C0C6 399 aa2.7□□□□□ -1.98
CCDC39-203ENST00000473854 IFITM10A6NMD0 228 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF785A8K8V0 405 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 GCATO75600 419 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 RPLP2P05387 115 aaKnown RBP2.69□□□□□ -1.98
CCDC39-203ENST00000473854 FESP07332 822 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 PDHA1P08559 390 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 FGF3P11487 239 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-203ENST00000473854 PPIFP30405 207 aaKnown RBP2.69□□□□□ -1.98
CCDC39-203ENST00000473854 PGGT1BP53609 377 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 TCF15Q12870 199 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 CCDC93Q567U6 631 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF324BQ6AW86 544 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-203ENST00000473854 PPP4R3AQ6IN85 833 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 RNF180Q86T96 592 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 DHX37Q8IY37 1157 aaKnown RBP2.69□□□□□ -1.98
CCDC39-203ENST00000473854 B4GALNT2Q8NHY0 566 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 HDAC10Q969S8 669 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms