RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 ZNF677Q86XU0 584 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 SLC2A14Q8TDB8 520 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 DDX1Q92499 740 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 CYFIP2Q96F07 1278 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 CHP1Q99653 195 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 AGPAT1Q99943 283 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 MED10Q9BTT4 135 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 ZNF576Q9H609 170 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 RXFP1Q9HBX9 757 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 TSPAN16Q9UKR8 245 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.286e-6■■■■■ 55.1
TRAPPC12-217ENST00000473348 IRAK3Q9Y616 596 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 BZW2Q9Y6E2 419 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 C2orf16Q68DN1 1984 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
TRAPPC12-217ENST00000473348 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 C2orf71A6NGG8 1288 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 HIDE1A8MVS5 230 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 M0QYV0 167 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 TEX28O15482 410 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 MICAL2O94851 1124 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 MMEP08473 750 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 CFHP08603 1231 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 CNPP09543 421 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 EIF4A3P38919 411 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 FMO1Q01740 532 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 GPR17Q13304 367 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 CNGA2Q16280 664 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 PDE12Q6L8Q7 609 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 CYP26C1Q6V0L0 522 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 C4orf50Q6ZRC1 276 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 TMEM139Q8IV31 216 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 PGLYRP2Q96PD5 576 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 HNRNPABQ99729 332 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 SYT11Q9BT88 431 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 ZNF518BQ9C0D4 1074 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 PDCL3Q9H2J4 239 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 KRT82Q9NSB4 513 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 SEPT11Q9NVA2 429 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 ANAPC1Q9H1A4 1944 aa13.31□□□□□ -0.28
TRAPPC12-217ENST00000473348 PRRC2BQ5JSZ5 2229 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 SSU72P8A0A1W2PR75 194 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 RFXAPO00287 272 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 CLDN5O00501 218 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 ADH1AP07327 375 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 FAM200BP0CF97 657 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 TNFAIP3P21580 790 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 RAB33AQ14088 237 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 DENND1BQ6P3S1 775 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 LCLAT1Q6UWP7 414 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 RNF19BQ6ZMZ0 732 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 PAQR9Q6ZVX9 377 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 MRPL43Q8N983 215 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 CCDC112Q8NEF3 446 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 KLHL5Q96PQ7 755 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 RHOBTB2Q9BYZ6 727 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 NHEJ1Q9H9Q4 299 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 HESX1Q9UBX0 185 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 LAMA3Q16787 3333 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
TRAPPC12-217ENST00000473348 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 NRDCO43847 1150 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 AKR1B10O60218 316 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 AP1G2O75843 785 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 VNN2O95498 520 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 BDNFP23560 247 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 KIF11P52732 1056 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 BCAT1P54687 386 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 CCZ1BP86790 482 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 CCZ1P86791 482 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 PTPROQ16827 1216 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 CFAP221Q4G0U5 840 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
TRAPPC12-217ENST00000473348 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms