RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PHF7Q9BWX1 381 aaPredicted RBP22.12■■□□□ 1.13
TOP3A-204ENST00000472959 ELOVL4Q9GZR5 314 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 POMKQ9H5K3 350 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 CBX8Q9HC52 389 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 MTCL1Q9Y4B5 1905 aaKnown RBP22.12■■□□□ 1.13
TOP3A-204ENST00000472959 XIRP2A4UGR9 3374 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 ATP8B3O60423 1300 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 SLC9A1P19634 815 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 CDR1P51861 262 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 COPB1P53618 953 aaKnown RBP22.11■■□□□ 1.13
TOP3A-204ENST00000472959 TPM4P67936 248 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 VEPH1Q14D04 833 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 FKBP15Q5T1M5 1219 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 SMYD5Q6GMV2 418 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 GRASPQ7Z6J2 395 aaPredicted RBP22.11■■□□□ 1.13
TOP3A-204ENST00000472959 UBR7Q8N806 425 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 LEMD2Q8NC56 503 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 FEZF2Q8TBJ5 459 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 CEP295NLQ96MC4 621 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 TWNKQ96RR1 684 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 B3GNT5Q9BYG0 378 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 VPS16Q9H269 839 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 AVENQ9NQS1 362 aaPredicted RBP22.11■■□□□ 1.13
TOP3A-204ENST00000472959 CEP72Q9P209 647 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 DNMT3BQ9UBC3 853 aaKnown RBP22.11■■□□□ 1.13
TOP3A-204ENST00000472959 APEX2Q9UBZ4 518 aa22.11■■□□□ 1.13
TOP3A-204ENST00000472959 CLUHO75153 1309 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 SOAT2O75908 522 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 BDNFP23560 247 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 ORC1Q13415 861 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 RRAGAQ7L523 313 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 ARHGEF19Q8IW93 802 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 FAM200AQ8TCP9 573 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 PSMG2Q969U7 264 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 TMEM176AQ96HP8 235 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 LPIN3Q9BQK8 851 aa22.1■■□□□ 1.13
TOP3A-204ENST00000472959 UBE2TQ9NPD8 197 aaPredicted RBP22.1■■□□□ 1.13
TOP3A-204ENST00000472959 ATF6P18850 670 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 ACO1P21399 889 aaKnown RBP22.09■■□□□ 1.13
TOP3A-204ENST00000472959 RAD23BP54727 409 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 MFAP3P55082 362 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 PABPC1LQ4VXU2 614 aaKnown RBP22.09■■□□□ 1.13
TOP3A-204ENST00000472959 LRSAM1Q6UWE0 723 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 DNAJB7Q7Z6W7 309 aaPredicted RBP22.09■■□□□ 1.13
TOP3A-204ENST00000472959 ADHFE1Q8IWW8 467 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 FUKQ8N0W3 1084 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 HEXIM2Q96MH2 286 aaKnown RBP22.09■■□□□ 1.13
TOP3A-204ENST00000472959 MED10Q9BTT4 135 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 USTQ9Y2C2 406 aa22.09■■□□□ 1.13
TOP3A-204ENST00000472959 LGALS16A8MUM7 142 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 TRIM66O15016 1216 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 RHOP08100 348 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 ATP1A3P13637 1013 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 FSHRP23945 695 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 GRIK1P39086 918 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 EPHA5P54756 1037 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 KCNMA1Q12791 1236 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 ZNF394Q53GI3 561 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 CYP4A22Q5TCH4 519 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 OTOP3Q7RTS5 596 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 APTXQ7Z2E3 356 aaKnown RBP22.08■■□□□ 1.13
TOP3A-204ENST00000472959 LUZP1Q86V48 1076 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 SCN4BQ8IWT1 228 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 C12orf29Q8N999 325 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 SLC4A11Q8NBS3 891 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 KAT5Q92993 513 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 SMARCD1Q96GM5 515 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 C8orf48Q96LL4 319 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 KREMEN1Q96MU8 473 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 HNRNPABQ99729 332 aaKnown RBP22.08■■□□□ 1.13
TOP3A-204ENST00000472959 CORO1BQ9BR76 489 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 ZNF518BQ9C0D4 1074 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 TSPY26PQ9H489 355 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 ASAH2Q9NR71 780 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 HCFC1R1Q9NWW0 138 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.08■■□□□ 1.13
TOP3A-204ENST00000472959 KIAA1257Q9ULG3 409 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 NR2E1Q9Y466 385 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 PCDHB4Q9Y5E5 795 aa22.08■■□□□ 1.13
TOP3A-204ENST00000472959 SPTBN5Q9NRC6 3674 aaKnown RBP22.08■■□□□ 1.13
TOP3A-204ENST00000472959 GOLGA6L19H0YKK7 550 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 CLDN5O00501 218 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 ZNF197O14709 1029 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 FGF19O95750 216 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 PAEPP09466 180 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 CCDC130P13994 396 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 ANXA13P27216 316 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 ZP2Q05996 745 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 TAF12Q16514 161 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 DDR2Q16832 855 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 TMEM270Q6UE05 265 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 PAQR9Q6ZVX9 377 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 FAM35AQ86V20 835 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 SLC2A14Q8TDB8 520 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 GIPC2Q8TF65 315 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 CYFIP2Q96F07 1278 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 SPATA17Q96L03 361 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 SIX2Q9NPC8 291 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 FAM49BQ9NUQ9 324 aa22.07■■□□□ 1.12
TOP3A-204ENST00000472959 CNTN6Q9UQ52 1028 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms